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Cell cycle regulation of human DNA repair and chromatin remodeling genes

DNA repair, 2015-06, Vol.30, p.53-67

2015

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The microbial communities in two apparently physically separated deep subsurface oil reservoirs show extensive DNA sequence similarities

Environmental microbiology, 2014-02, Vol.16 (2), p.545-558

2014

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MotifLab: a tools and data integration workbench for motif discovery and regulatory sequence analysis

BMC bioinformatics, 2013-01, Vol.14 (1), p.9-9, Article 9

2013

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A manually curated ChIP-seq benchmark demonstrates room for improvement in current peak-finder programs

Nucleic acids research, 2011-03, Vol.39 (4), p.e25

2011

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A novel POLE mutation associated with cancers of colon, pancreas, ovaries and small intestine

Familial cancer, 2015-09, Vol.14 (3), p.437-448

2015

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A Balanced Tissue Composition Reveals New Metabolic and Gene Expression Markers in Prostate Cancer

PloS one, 2016-04, Vol.11 (4), p.e0153727-e0153727

2016

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Pathway Analysis of Skin from Psoriasis Patients after Adalimumab Treatment Reveals New Early Events in the Anti-Inflammatory Mechanism of Anti-TNF-[alpha]

PloS one, 2016-12, Vol.11 (12), p.e0167437

2016

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Human ABH3 structure and key residues for oxidative demethylation to reverse DNA/RNA damage

The EMBO journal, 2006-07, Vol.25 (14), p.3389-3397

2006

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Safety in numbers: multiple occurrences of highly similar homologs among Azotobacter vinelandii carbohydrate metabolism proteins probably confer adaptive benefits

BMC genomics, 2014-03, Vol.15 (1), p.192-192

2014

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PriorsEditor: a tool for the creation and use of positional priors in motif discovery

Bioinformatics, 2010-09, Vol.26 (17), p.2195-2197

2010

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Enhanced Efficacy of Bleomycin in Bladder Cancer Cells by Photochemical Internalization

BioMed research international, 2014-01, Vol.2014, p.921296-10

2014

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Improved benchmarks for computational motif discovery

BMC bioinformatics, 2007-06, Vol.8 (1), p.193-193, Article 193

2007

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Chromatin states reveal functional associations for globally defined transcription start sites in four human cell lines

BMC genomics, 2014-03, Vol.15 (1), p.120-120

2014

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Clustered ChIP-Seq-defined transcription factor binding sites and histone modifications map distinct classes of regulatory elements

BMC biology, 2011-11, Vol.9 (1), p.80-80, Article 80

2011

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Gene signatures ESC, MYC and ERG-fusion are early markers of a potentially dangerous subtype of prostate cancer

BMC medical genomics, 2014-08, Vol.7 (1), p.50-50, Article 50

2014

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Cell-type specificity of ChIP-predicted transcription factor binding sites

BMC genomics, 2012-08, Vol.13 (1), p.372-372, Article 372

2012

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The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding

BMC bioinformatics, 2012-07, Vol.13 (1), p.176-176, Article 176

2012

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Bioinformatic mapping of AlkB homology domains in viruses

BMC genomics, 2005-01, Vol.6 (1), p.1-1, Article 1

2005

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Relationship between operon preference and functional properties of persistent genes in bacterial genomes

BMC genomics, 2010-01, Vol.11 (1), p.71-71, Article 71

2010

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Compo: composite motif discovery using discrete models

BMC bioinformatics, 2008-12, Vol.9 (1), p.527-527, Article 527

2008

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Protein Alpha Shape (PAS) Dock: a new gaussian-based score function suitable for docking in homology modelled protein structures

Journal of computer-aided molecular design, 2006-03, Vol.20 (3), p.131-144

2006

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Differential Gene Expression Downstream of Toll-like Receptors (TLRs)

The Journal of biological chemistry, 2010-05, Vol.285 (22), p.17011-17019

2010

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Comparative Genomics to Delineate Pathogenic Potential in Non-O157 Shiga Toxin-Producing Escherichia coli (STEC) from Patients with and without Haemolytic Uremic Syndrome (HUS) in Norway: e111788

PloS one, 2014-10, Vol.9 (10)

2014

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Lipases and esterases: a review of their sequences, structure and evolution

Biotechnology Annual Review, 1995, Vol.1, p.315-371

1995

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Uracil in DNA--occurrence, consequences and repair

Oncogene, 2002-12, Vol.21 (58), p.8935-8948

2002

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Cell cycle regulation of human DNA repair and chromatin remodeling genes

The microbial communities in two apparently physically separated deep subsurface oil reservoirs show extensive DNA sequence similarities

MotifLab: a tools and data integration workbench for motif discovery and regulatory sequence analysis

A manually curated ChIP-seq benchmark demonstrates room for improvement in current peak-finder programs

A novel POLE mutation associated with cancers of colon, pancreas, ovaries and small intestine

A Balanced Tissue Composition Reveals New Metabolic and Gene Expression Markers in Prostate Cancer

Pathway Analysis of Skin from Psoriasis Patients after Adalimumab Treatment Reveals New Early Events in the Anti-Inflammatory Mechanism of Anti-TNF-[alpha]

Human ABH3 structure and key residues for oxidative demethylation to reverse DNA/RNA damage

Safety in numbers: multiple occurrences of highly similar homologs among Azotobacter vinelandii carbohydrate metabolism proteins probably confer adaptive benefits

PriorsEditor: a tool for the creation and use of positional priors in motif discovery

Enhanced Efficacy of Bleomycin in Bladder Cancer Cells by Photochemical Internalization

Improved benchmarks for computational motif discovery

Chromatin states reveal functional associations for globally defined transcription start sites in four human cell lines

Clustered ChIP-Seq-defined transcription factor binding sites and histone modifications map distinct classes of regulatory elements

Gene signatures ESC, MYC and ERG-fusion are early markers of a potentially dangerous subtype of prostate cancer

Cell-type specificity of ChIP-predicted transcription factor binding sites

The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding

Bioinformatic mapping of AlkB homology domains in viruses

Relationship between operon preference and functional properties of persistent genes in bacterial genomes

Compo: composite motif discovery using discrete models

Protein Alpha Shape (PAS) Dock: a new gaussian-based score function suitable for docking in homology modelled protein structures

Differential Gene Expression Downstream of Toll-like Receptors (TLRs)

Comparative Genomics to Delineate Pathogenic Potential in Non-O157 Shiga Toxin-Producing Escherichia coli (STEC) from Patients with and without Haemolytic Uremic Syndrome (HUS) in Norway: e111788

Lipases and esterases: a review of their sequences, structure and evolution

Uracil in DNA--occurrence, consequences and repair

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