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MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons

PloS one, 2011-09, Vol.6 (9), p.e22594-e22594

2011

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A glimpse on the pattern of rodent diversification: a phylogenetic approach

BMC evolutionary biology, 2012-06, Vol.12 (1), p.88

2012

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A phylogenomic framework and timescale for comparative studies of tunicates

BMC biology, 2018-04, Vol.16 (1), p.39-39, Article 39

2018

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MACSE v2: Toolkit for the Alignment of Coding Sequences Accounting for Frameshifts and Stop Codons

Molecular biology and evolution, 2018-10, Vol.35 (10), p.2582-2584

2018

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Fast and accurate branch lengths estimation for phylogenomic trees

BMC bioinformatics, 2016-01, Vol.17 (7), p.23-23, Article 23

2016

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A phylogenetic perspective on the evolution of Mediterranean teleost fishes

PloS one, 2012-05, Vol.7 (5), p.e36443-e36443

2012

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The Timing of Eukaryotic Evolution: Does a Relaxed Molecular Clock Reconcile Proteins and Fossils?

Proceedings of the National Academy of Sciences - PNAS, 2004-10, Vol.101 (43), p.15386-15391

2004

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An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models

BMC evolutionary biology, 2009-08, Vol.9 (1), p.187, Article 187

2009

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Fast and robust characterization of time-heterogeneous sequence evolutionary processes using substitution mapping

PloS one, 2012-03, Vol.7 (3), p.e33852

2012

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Less is more in mammalian phylogenomics: AT-rich genes minimize tree conflicts and unravel the root of placental mammals

Molecular biology and evolution, 2013-09, Vol.30 (9), p.2134-2144

2013

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Accelerated Evolutionary Rate of Housekeeping Genes in Tunicates

Journal of molecular evolution, 2010-08, Vol.71 (2), p.153-167

2010

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Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae)

BMC evolutionary biology, 2011-06, Vol.11 (1), p.181, Article 181

2011

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The evolutionary radiation of Arvicolinae rodents (voles and lemmings): relative contribution of nuclear and mitochondrial DNA phylogenies

BMC evolutionary biology, 2006-10, Vol.6, p.80

2006

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Protected and Threatened Components of Fish Biodiversity in the Mediterranean Sea

Current biology, 2011-06, Vol.21 (12), p.1044-1050

2011

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Rodents of the Caribbean: origin and diversification of hutias unravelled by next-generation museomics

Biology letters (2005), 2014-07, Vol.10 (7), p.20140266-20140266

2014

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Convergent Acquisition of Nonembryonic Development in Styelid Ascidians

Molecular biology and evolution, 2018-07, Vol.35 (7), p.1728-1743

2018

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Molecular phylogenetics unveils the ancient evolutionary origins of the enigmatic fairy armadillos

Molecular phylogenetics and evolution, 2012-02, Vol.62 (2), p.673-680

2012

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PhySIC_IST: cleaning source trees to infer more informative supertrees

BMC bioinformatics, 2008-10, Vol.9 (1), p.413-413, Article 413

2008

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Molecular and Morphological Phylogenies of Ruminantia and the Alternative Position of the Moschidae

Systematic biology, 2003-04, Vol.52 (2), p.206-228

2003

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Arrival and Diversification of Caviomorph Rodents and Platyrrhine Primates in South America

Systematic biology, 2006-04, Vol.55 (2), p.228-244

2006

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Conserved Features and Evolutionary Shifts of the EDA Signaling Pathway Involved in Vertebrate Skin Appendage Development

Molecular biology and evolution, 2008-05, Vol.25 (5), p.912-928

2008

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Molecular phylogenetics of Diseae (Orchidaceae): a contribution from nuclear ribosomal ITS sequences

American journal of botany, 1999-06, Vol.86 (6), p.887-899

1999

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Representing taxonomic, phylogenetic and functional diversity: new challenges for Mediterranean marine-protected areas

Diversity & distributions, 2015-02, Vol.21 (2), p.175-187

2015

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SuperTriplets: a triplet-based supertree approach to phylogenomics

Bioinformatics, 2010-06, Vol.26 (12), p.i115-i123

2010

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Evolution under domestication: contrasting functional morphology of seedlings in domesticated cassava and its closest wild relatives

The New phytologist, 2005-04, Vol.166 (1), p.305-318

2005

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MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons

A glimpse on the pattern of rodent diversification: a phylogenetic approach

A phylogenomic framework and timescale for comparative studies of tunicates

MACSE v2: Toolkit for the Alignment of Coding Sequences Accounting for Frameshifts and Stop Codons

Fast and accurate branch lengths estimation for phylogenomic trees

A phylogenetic perspective on the evolution of Mediterranean teleost fishes

The Timing of Eukaryotic Evolution: Does a Relaxed Molecular Clock Reconcile Proteins and Fossils?

An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models

Fast and robust characterization of time-heterogeneous sequence evolutionary processes using substitution mapping

Less is more in mammalian phylogenomics: AT-rich genes minimize tree conflicts and unravel the root of placental mammals

Accelerated Evolutionary Rate of Housekeeping Genes in Tunicates

Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae)

The evolutionary radiation of Arvicolinae rodents (voles and lemmings): relative contribution of nuclear and mitochondrial DNA phylogenies

Protected and Threatened Components of Fish Biodiversity in the Mediterranean Sea

Rodents of the Caribbean: origin and diversification of hutias unravelled by next-generation museomics

Convergent Acquisition of Nonembryonic Development in Styelid Ascidians

Molecular phylogenetics unveils the ancient evolutionary origins of the enigmatic fairy armadillos

PhySIC_IST: cleaning source trees to infer more informative supertrees

Molecular and Morphological Phylogenies of Ruminantia and the Alternative Position of the Moschidae

Arrival and Diversification of Caviomorph Rodents and Platyrrhine Primates in South America

Conserved Features and Evolutionary Shifts of the EDA Signaling Pathway Involved in Vertebrate Skin Appendage Development

Molecular phylogenetics of Diseae (Orchidaceae): a contribution from nuclear ribosomal ITS sequences

Representing taxonomic, phylogenetic and functional diversity: new challenges for Mediterranean marine-protected areas

SuperTriplets: a triplet-based supertree approach to phylogenomics

Evolution under domestication: contrasting functional morphology of seedlings in domesticated cassava and its closest wild relatives

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