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Reptile: representative tiling for short read error correction

Bioinformatics, 2010-10, Vol.26 (20), p.2526-2533

2010

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An accurate and interpretable model for antimicrobial resistance in pathogenic Escherichia coli from livestock and companion animal species

PloS one, 2023-08, Vol.18 (8), p.e0290473-e0290473

2023

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p65 signaling dynamics drive the developmental progression of hematopoietic stem and progenitor cells through cell cycle regulation

Nature communications, 2024-09, Vol.15 (1), p.7787-22, Article 7787

2024

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Nod1-dependent NF-kB activation initiates hematopoietic stem cell specification in response to small Rho GTPases

Nature communications, 2023-11, Vol.14 (1), p.7668-7668, Article 7668

2023

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Next-generation yeast-two-hybrid analysis with Y2H-SCORES identifies novel interactors of the MLA immune receptor

PLoS computational biology, 2021-04, Vol.17 (4), p.e1008890-e1008890

2021

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Dietary Soluble and Insoluble Fiber With or Without Enzymes Altered the Intestinal Microbiota in Weaned Pigs Challenged With Enterotoxigenic E. coli F18

Frontiers in microbiology, 2020-05, Vol.11, p.1110-1110

2020

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Retrospective evaluation of a dose‐dependent effect of angiotensin‐converting enzyme inhibitors on long‐term outcome in dogs with cardiac disease

Journal of veterinary internal medicine, 2021-09, Vol.35 (5), p.2102-2111

2021

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Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic Xanthomonas spp

Journal of Bacteriology, 2011-10, Vol.193 (19), p.5450-5464

2011

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Accurate estimation of molecular counts from amplicon sequence data with unique molecular identifiers

Bioinformatics (Oxford, England), 2023-01, Vol.39 (1)

2023

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AmpliCI: a high-resolution model-based approach for denoising Illumina amplicon data

Bioinformatics, 2021-01, Vol.36 (21), p.5151-5158

2021

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Repeat-aware modeling and correction of short read errors

BMC bioinformatics, 2011-02, Vol.12 Suppl 1 (S1), p.S52-S52, Article S52

2011

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CAPG: comprehensive allopolyploid genotyper

Bioinformatics (Oxford, England), 2023-01, Vol.39 (1)

2023

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An efficient k ‐modes algorithm for clustering categorical datasets

Statistical analysis and data mining, 2022-02, Vol.15 (1), p.83-97

2022

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Genomic Sequence and Phylogenetic Analysis of Culex Flavivirus, an Insect-Specific Flavivirus, Isolated From Culex pipiens (Diptera: Culicidae) in Iowa

Journal of medical entomology, 2009-07, Vol.46 (4), p.934-941

2009

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Predicting allosteric pockets in protein biological assemblages

Bioinformatics (Oxford, England), 2023-05, Vol.39 (5)

2023

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Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier

Bioinformatics, 2022-05, Vol.38 (10), p.2727-2733

2022

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Unsupervised contrastive peak caller for ATAC-seq

Genome research, 2023-07

2023

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Detection of flaviviruses and orthobunyaviruses in mosquitoes in the Yucatan Peninsula of Mexico in 2008

Vector borne and zoonotic diseases (Larchmont, N.Y.), 2010-10, Vol.10 (8), p.777-783

2010

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Complete genome sequence of T'Ho virus, a novel putative flavivirus from the Yucatan Peninsula of Mexico

Virology journal, 2017-06, Vol.14 (1), p.110-110, Article 110

2017

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Decreased Infectivity of a Neutralization-Resistant Equine Infectious Anemia Virus Variant Can Be Overcome by Efficient Cell-to-Cell Spread

Journal of Virology, 2011-10, Vol.85 (19), p.10421-10424

2011

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Isolation and sequence analysis of Culex flavivirus from Culex interrogator and Culex quinquefasciatus in the Yucatan Peninsula of Mexico

Archives of virology, 2010-06, Vol.155 (6), p.983-986

2010

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The genomic evolution of H1 influenza A viruses from swine detected in the United States between 2009 and 2016

Journal of general virology, 2017-08, Vol.98 (8), p.2001-2010

2017

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Dynamic relationships among pathways producing hydrocarbons and fatty acids of maize silk cuticular waxes

Plant physiology (Bethesda), 2024-06, Vol.195 (3), p.2234-2255

2024

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Identifying dramatic selection shifts in phylogenetic trees

BMC evolutionary biology, 2007-02, Vol.7 Suppl 1 (Suppl 1), p.S10

Dorman, Karin S

2007

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Dynamics of lentiviral infection in vivo in the absence of adaptive immune responses

Virology (New York, N.Y.), 2018-01, Vol.513, p.108-113

2018

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Reptile: representative tiling for short read error correction

An accurate and interpretable model for antimicrobial resistance in pathogenic Escherichia coli from livestock and companion animal species

p65 signaling dynamics drive the developmental progression of hematopoietic stem and progenitor cells through cell cycle regulation

Nod1-dependent NF-kB activation initiates hematopoietic stem cell specification in response to small Rho GTPases

Next-generation yeast-two-hybrid analysis with Y2H-SCORES identifies novel interactors of the MLA immune receptor

Dietary Soluble and Insoluble Fiber With or Without Enzymes Altered the Intestinal Microbiota in Weaned Pigs Challenged With Enterotoxigenic E. coli F18

Retrospective evaluation of a dose‐dependent effect of angiotensin‐converting enzyme inhibitors on long‐term outcome in dogs with cardiac disease

Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic Xanthomonas spp

Accurate estimation of molecular counts from amplicon sequence data with unique molecular identifiers

AmpliCI: a high-resolution model-based approach for denoising Illumina amplicon data

Repeat-aware modeling and correction of short read errors

CAPG: comprehensive allopolyploid genotyper

An efficient k ‐modes algorithm for clustering categorical datasets

Genomic Sequence and Phylogenetic Analysis of Culex Flavivirus, an Insect-Specific Flavivirus, Isolated From Culex pipiens (Diptera: Culicidae) in Iowa

Predicting allosteric pockets in protein biological assemblages

Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier

Unsupervised contrastive peak caller for ATAC-seq

Detection of flaviviruses and orthobunyaviruses in mosquitoes in the Yucatan Peninsula of Mexico in 2008

Complete genome sequence of T'Ho virus, a novel putative flavivirus from the Yucatan Peninsula of Mexico

Decreased Infectivity of a Neutralization-Resistant Equine Infectious Anemia Virus Variant Can Be Overcome by Efficient Cell-to-Cell Spread

Isolation and sequence analysis of Culex flavivirus from Culex interrogator and Culex quinquefasciatus in the Yucatan Peninsula of Mexico

The genomic evolution of H1 influenza A viruses from swine detected in the United States between 2009 and 2016

Dynamic relationships among pathways producing hydrocarbons and fatty acids of maize silk cuticular waxes

Identifying dramatic selection shifts in phylogenetic trees

Dynamics of lentiviral infection in vivo in the absence of adaptive immune responses

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