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Analysis of αSMA‐Labeled Progenitor Cell Commitment Identifies Notch Signaling as an Important Pathway in Fracture Healing

Journal of bone and mineral research, 2014, Vol.29 (5), p.1283-1294

2014

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Chromatin interaction networks revealed unique connectivity patterns of broad H3K4me3 domains and super enhancers in 3D chromatin

Scientific reports, 2017-10, Vol.7 (1), p.14466-12, Article 14466

2017

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Chemotherapy-induced oral mucositis is associated with detrimental bacterial dysbiosis

Microbiome, 2019-04, Vol.7 (1), p.66-66, Article 66

2019

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In-depth characterization of microRNA transcriptome in melanoma

PloS one, 2013-09, Vol.8 (9), p.e72699-e72699

2013

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Genome-wide distribution of 5hmC in the dental pulp of mouse molars and incisors

Journal of biochemistry (Tokyo), 2022-01, Vol.171 (1), p.123-129

2022

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Excitotoxic stimulation activates distinct pathogenic and protective expression signatures in the hippocampus

Journal of cellular and molecular medicine, 2021-09, Vol.25 (18), p.9011-9027

2021

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Single-cell Transcriptome Landscape of DNA Methylome Regulators Associated with Orofacial Clefts in the Mouse Dental Pulp

The Cleft palate-craniofacial journal, 2024-09, Vol.61 (9), p.1480-1492

2024

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Deep Pathway Analysis V2.0: A Pathway Analysis Framework Incorporating Multi-Dimensional Omics Data

IEEE/ACM transactions on computational biology and bioinformatics, 2021-01, Vol.18 (1), p.373-385

2021

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GABRA2 Alcohol Dependence Risk Allele is Associated with Reduced Expression of Chromosome 4p12 GABAA Subunit Genes in Human Neural Cultures

Alcoholism, clinical and experimental research, 2015-09, Vol.39 (9), p.1654-1664

2015

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Identification of differentially expressed genes between osteoblasts and osteocytes

Bone (New York, N.Y.), 2009-10, Vol.45 (4), p.682-692

2009

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A framework using topological pathways for deeper analysis of transcriptome data

BMC genomics, 2020-03, Vol.21 (Suppl 1), p.834-11, Article 834

2020

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FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods

Genome Biology, 2018-03, Vol.19 (1), p.38-38, Article 38

2018

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Predicting the targets of IRF8 and NFATc1 during osteoclast differentiation using the machine learning method framework cTAP

BMC genomics, 2022-01, Vol.23 (1), p.14-14, Article 14

2022

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Structural variation calling and genotyping by moment-based deep convolutional neural networks

International journal of data mining and bioinformatics, 2021, Vol.25 (1/2), p.37

2021

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Genome-wide analysis of FoxO1 binding in hepatic chromatin: potential involvement of FoxO1 in linking retinoid signaling to hepatic gluconeogenesis

Nucleic acids research, 2012-12, Vol.40 (22), p.11499-11509

2012

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Single-Cell Transcriptome Analysis Defines Expression of Kabuki Syndrome-Associated KMT2D Targets and Interacting Partners

Stem cells international, 2022-08, Vol.2022, p.4969441-9

2022

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Efficient methods for hierarchical multi-omic feature extraction and visualisation

International journal of data mining and bioinformatics, 2020, Vol.23 (4), p.285

2020

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BioTarget: A Computational Framework Identifying Cancer Type Specific Transcriptional Targets of Immune Response Pathways

Scientific reports, 2019-06, Vol.9 (1), p.9029-15, Article 9029

2019

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High-Throughput Phosphotyrosine Profiling Using SH2 Domains

Molecular cell, 2007-06, Vol.26 (6), p.899-915

2007

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Narrative Review of the Association between Cervical Region Treatment and Facial Paralysis

Journal of acupuncture research, 2023-11, Vol.40 (4), p.319-328

2023

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TriPOINT: a software tool to prioritize important genes in pathways and their non-coding regulators

Bioinformatics, 2019-08, Vol.35 (15), p.2686-2689

2019

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QuIN: A Web Server for Querying and Visualizing Chromatin Interaction Networks

PLoS computational biology, 2016-06, Vol.12 (6), p.e1004809-e1004809

2016

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Acupuncture for Adult Obstructive Sleep Apnea or Obstructive Sleep Apnea-Hypopnea Syndrome: A Review of the China National Knowledge Infrastructure Database

Journal of acupuncture research, 2022-11, Vol.39 (4), p.275-282

2022

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rPAC: Route based pathway analysis for cohorts of gene expression data sets

Methods (San Diego, Calif.), 2022-02, Vol.198, p.76-87

2022

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The chromatin accessibility landscape in the dental pulp of mouse molars and incisors

Acta biochimica polonica, 2022-02

2022

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Analysis of αSMA‐Labeled Progenitor Cell Commitment Identifies Notch Signaling as an Important Pathway in Fracture Healing

Chromatin interaction networks revealed unique connectivity patterns of broad H3K4me3 domains and super enhancers in 3D chromatin

Chemotherapy-induced oral mucositis is associated with detrimental bacterial dysbiosis

In-depth characterization of microRNA transcriptome in melanoma

Genome-wide distribution of 5hmC in the dental pulp of mouse molars and incisors

Excitotoxic stimulation activates distinct pathogenic and protective expression signatures in the hippocampus

Single-cell Transcriptome Landscape of DNA Methylome Regulators Associated with Orofacial Clefts in the Mouse Dental Pulp

Deep Pathway Analysis V2.0: A Pathway Analysis Framework Incorporating Multi-Dimensional Omics Data

GABRA2 Alcohol Dependence Risk Allele is Associated with Reduced Expression of Chromosome 4p12 GABAA Subunit Genes in Human Neural Cultures

Identification of differentially expressed genes between osteoblasts and osteocytes

A framework using topological pathways for deeper analysis of transcriptome data

FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods

Predicting the targets of IRF8 and NFATc1 during osteoclast differentiation using the machine learning method framework cTAP

Structural variation calling and genotyping by moment-based deep convolutional neural networks

Genome-wide analysis of FoxO1 binding in hepatic chromatin: potential involvement of FoxO1 in linking retinoid signaling to hepatic gluconeogenesis

Single-Cell Transcriptome Analysis Defines Expression of Kabuki Syndrome-Associated KMT2D Targets and Interacting Partners

Efficient methods for hierarchical multi-omic feature extraction and visualisation

BioTarget: A Computational Framework Identifying Cancer Type Specific Transcriptional Targets of Immune Response Pathways

High-Throughput Phosphotyrosine Profiling Using SH2 Domains

Narrative Review of the Association between Cervical Region Treatment and Facial Paralysis

TriPOINT: a software tool to prioritize important genes in pathways and their non-coding regulators

QuIN: A Web Server for Querying and Visualizing Chromatin Interaction Networks

Acupuncture for Adult Obstructive Sleep Apnea or Obstructive Sleep Apnea-Hypopnea Syndrome: A Review of the China National Knowledge Infrastructure Database

rPAC: Route based pathway analysis for cohorts of gene expression data sets

The chromatin accessibility landscape in the dental pulp of mouse molars and incisors

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