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Machine learning-based approach KEVOLVE efficiently identifies SARS-CoV-2 variant-specific genomic signatures

PloS one, 2024-01, Vol.19 (1), p.e0296627-e0296627

2024

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Deep learning‐ and image processing‐based methods for automatic estimation of leaf herbivore damage

Methods in ecology and evolution, 2024-04, Vol.15 (4), p.732-743

2024

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A machine learning approach for viral genome classification

BMC bioinformatics, 2017-04, Vol.18 (1), p.208-208, Article 208

2017

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Classification of bioinformatics workflows using weighted versions of partitioning and hierarchical clustering algorithms

BMC bioinformatics, 2015-03, Vol.16 (1), p.68-68, Article 68

2015

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Computational Methods for Structure-to-Function Analysis of Diet-Derived Catechins-Mediated Targeting of In Vitro Vasculogenic Mimicry

Cancer informatics, 2021, Vol.20, p.11769351211009229-11769351211009229

2021

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Armadillo 1.1: an original workflow platform for designing and conducting phylogenetic analysis and simulations

PloS one, 2012-01, Vol.7 (1), p.e29903-e29903

2012

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Improving candidate Biosynthetic Gene Clusters in fungi through reinforcement learning

Bioinformatics, 2022-08, Vol.38 (16), p.3984-3991

2022

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Prediction of human miRNA target genes using computationally reconstructed ancestral mammalian sequences

Nucleic acids research, 2017-01, Vol.45 (2), p.556-566

2017

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A Contemporary Survey on Multisource Information Fusion for Smart Sustainable Cities: Emerging Trends and Persistent Challenges

Information fusion, 2025-02, Vol.114, p.102667, Article 102667

2025

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A novel comprehensive wheat miRNA database, including related bioinformatics software

Current plant biology, 2016-11, Vol.7-8 (C), p.31-33

2016

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Toward an Alignment-Free Method for Feature Extraction and Accurate Classification of Viral Sequences

Journal of computational biology, 2019-06, Vol.26 (6), p.519-535

2019

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T-GOWler: Discovering Generalized Process Models Within Texts

Journal of computational biology, 2017-08, Vol.24 (8), p.799-808

2017

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TOUCAN: a framework for fungal biosynthetic gene cluster discovery

NAR genomics and bioinformatics, 2020-12, Vol.2 (4)

2020

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Selected Papers from the Workshop on Computational Biology: Joint with the International Joint Conference on Artificial Intelligence and the International Conference on Machine Learning, 2018

Journal of computational biology, 2019-06, Vol.26 (6), p.507-508

2019

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Graph pattern mining on top of a domain ontology - preliminary results from a dairy production application

Procedia computer science, 2021, Vol.192, p.1227-1236

2021

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An integrative approach to identify hexaploid wheat miRNAome associated with development and tolerance to abiotic stress

BMC genomics, 2015-04, Vol.16 (1), p.339-339, Article 339

2015

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Preface: Selected Papers from the Workshop Bioinformatics and Artificial Intelligence Joined with the International Joint Conference on Artificial Intelligence

Journal of computational biology, 2017-08, Vol.24 (8), p.733-733

2017

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Face Recognition in the Wild

Procedia computer science, 2016, Vol.96, p.1571-1580

2016

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ProtNN: fast and accurate protein 3D-structure classification in structural and topological space

BioData mining, 2016-09, Vol.9 (1), p.30-30, Article 30

2016

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Subtle differences in selective pressures applied on the envelope gene of HIV-1 in pregnant versus non-pregnant women

Infection, genetics and evolution, 2018-08, Vol.62, p.141-150

2018

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Prior Density Learning in Variational Bayesian Phylogenetic Parameters Inference

Comparative Genomics, 2023, Vol.13883, p.112-130

2023

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Detecting genomic regions associated with a disease using variability functions and Adjusted Rand Index

BMC bioinformatics, 2011-10, Vol.12 Suppl 9 (S9), p.S9-S9, Article S9

2011

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Towards Mining Generalized Patterns from RDF Data and a Domain Ontology

Machine Learning and Principles and Practice of Knowledge Discovery in Databases, 2022, Vol.1524, p.268-278

2022

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Inference of sample-specific genetic interactions to increase accuracy of indication prioritization in oncology clinical trials and facilitate exploration of combined therapy opportunities

Journal of clinical oncology, 2022-06, Vol.40 (16_suppl), p.3123-3123

2022

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A New Effective Method for Estimating Missing Values in the Sequence Data Prior to Phylogenetic Analysis

Evolutionary bioinformatics online, 2006-01, Vol.2, p.237-246

2006

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Machine learning-based approach KEVOLVE efficiently identifies SARS-CoV-2 variant-specific genomic signatures

Deep learning‐ and image processing‐based methods for automatic estimation of leaf herbivore damage

A machine learning approach for viral genome classification

Classification of bioinformatics workflows using weighted versions of partitioning and hierarchical clustering algorithms

Computational Methods for Structure-to-Function Analysis of Diet-Derived Catechins-Mediated Targeting of In Vitro Vasculogenic Mimicry

Armadillo 1.1: an original workflow platform for designing and conducting phylogenetic analysis and simulations

Improving candidate Biosynthetic Gene Clusters in fungi through reinforcement learning

Prediction of human miRNA target genes using computationally reconstructed ancestral mammalian sequences

A Contemporary Survey on Multisource Information Fusion for Smart Sustainable Cities: Emerging Trends and Persistent Challenges

A novel comprehensive wheat miRNA database, including related bioinformatics software

Toward an Alignment-Free Method for Feature Extraction and Accurate Classification of Viral Sequences

T-GOWler: Discovering Generalized Process Models Within Texts

TOUCAN: a framework for fungal biosynthetic gene cluster discovery

Selected Papers from the Workshop on Computational Biology: Joint with the International Joint Conference on Artificial Intelligence and the International Conference on Machine Learning, 2018

Graph pattern mining on top of a domain ontology - preliminary results from a dairy production application

An integrative approach to identify hexaploid wheat miRNAome associated with development and tolerance to abiotic stress

Preface: Selected Papers from the Workshop Bioinformatics and Artificial Intelligence Joined with the International Joint Conference on Artificial Intelligence

Face Recognition in the Wild

ProtNN: fast and accurate protein 3D-structure classification in structural and topological space

Subtle differences in selective pressures applied on the envelope gene of HIV-1 in pregnant versus non-pregnant women

Prior Density Learning in Variational Bayesian Phylogenetic Parameters Inference

Detecting genomic regions associated with a disease using variability functions and Adjusted Rand Index

Towards Mining Generalized Patterns from RDF Data and a Domain Ontology

Inference of sample-specific genetic interactions to increase accuracy of indication prioritization in oncology clinical trials and facilitate exploration of combined therapy opportunities

A New Effective Method for Estimating Missing Values in the Sequence Data Prior to Phylogenetic Analysis

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