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Halogens in Protein–Ligand Binding Mechanism: A Structural Perspective

Journal of medicinal chemistry, 2019-11, Vol.62 (21), p.9341-9356

2019

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Current status of PTMs structural databases: applications, limitations and prospects

Amino acids, 2022-04, Vol.54 (4), p.575-590

2022

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MEDUSA: Prediction of Protein Flexibility from Sequence

Journal of molecular biology, 2021-05, Vol.433 (11), p.166882-166882, Article 166882

2021

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Conformational Strain Indicated by Ramachandran Angles for the Protein Backbone Is Only Weakly Related to the Flexibility

The journal of physical chemistry. B, 2021-03, Vol.125 (10), p.2597-2606

2021

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Same but not alike: Structure, flexibility and energetics of domains in multi-domain proteins are influenced by the presence of other domains

PLoS computational biology, 2018-02, Vol.14 (2), p.e1006008-e1006008

2018

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Transient association between proteins elicits alteration of dynamics at sites far away from interfaces

Structure (London), 2021-04, Vol.29 (4), p.371-384.e3

2021

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Structural and evolutionary exploration of the IL-3 family and its alpha subunit receptors

Amino acids, 2021-08, Vol.53 (8), p.1211-1227

2021

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A Dominant Mutation in the Gene Encoding the Erythroid Transcription Factor KLF1 Causes a Congenital Dyserythropoietic Anemia

American journal of human genetics, 2010-11, Vol.87 (5), p.721-727

2010

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A Perspective on the (Rise and Fall of) Protein β-Turns

International journal of molecular sciences, 2022-10, Vol.23 (20), p.12314

de Brevern, Alexandre G

2022

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Predicting protein flexibility through the prediction of local structures

Proteins, structure, function, and bioinformatics, 2011-03, Vol.79 (3), p.839-852

2011

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Structural Space of the Duffy Antigen/Receptor for Chemokines’ Intrinsically Disordered Ectodomain 1 Explored by Temperature Replica-Exchange Molecular Dynamics Simulations

International journal of molecular sciences, 2023-09, Vol.24 (17), p.13280

2023

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HumanLectome, an update of UniLectin for the annotation and prediction of human lectins

Nucleic acids research, 2024-01, Vol.52 (D1), p.D1683-D1693

2024

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SWORD2: hierarchical analysis of protein 3D structures

Nucleic acids research, 2022-07, Vol.50 (W1), p.W732-W738

2022

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CALR-ETdb, the database of calreticulin variants diversity in essential thrombocythemia

Platelets (Edinburgh), 2022-01, Vol.33 (1), p.157-167

2022

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PYTHIA: Deep Learning Approach for Local Protein Conformation Prediction

International journal of molecular sciences, 2021-08, Vol.22 (16), p.8831

2021

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Analysis of Protein Disorder Predictions in the Light of a Protein Structural Alphabet

Biomolecules (Basel, Switzerland), 2020-07, Vol.10 (7), p.1080

de Brevern, Alexandre G

2020

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Insights into Comparative Modeling of VHH Domains

International journal of molecular sciences, 2021-09, Vol.22 (18), p.9771

2021

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Investigating the Product Profiles and Structural Relationships of New Levansucrases with Conventional and Non-Conventional Substrates

International journal of molecular sciences, 2020-08, Vol.21 (15), p.5402

2020

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Accurate Representation of Protein-Ligand Structural Diversity in the Protein Data Bank (PDB)

International journal of molecular sciences, 2020-03, Vol.21 (6), p.2243

2020

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A Review of the Literature Organized Into a New Database: RHeference

Transfusion medicine reviews, 2021-04, Vol.35 (2), p.70-77

2021

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VHH Structural Modelling Approaches: A Critical Review

International journal of molecular sciences, 2022-03, Vol.23 (7), p.3721

2022

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Benchmarking the PEPOP methods for mimicking discontinuous epitopes

BMC bioinformatics, 2019-12, Vol.20 (1), p.738-738, Article 738

2019

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Investigation of the impact of PTMs on the protein backbone conformation

Amino acids, 2019-07, Vol.51 (7), p.1065-1079

2019

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Cis–trans isomerization of omega dihedrals in proteins

Amino acids, 2013-08, Vol.45 (2), p.279-289

2013

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PredyFlexy: flexibility and local structure prediction from sequence

Nucleic acids research, 2012-07, Vol.40 (Web Server issue), p.W317-W322

2012

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Halogens in Protein–Ligand Binding Mechanism: A Structural Perspective

Current status of PTMs structural databases: applications, limitations and prospects

MEDUSA: Prediction of Protein Flexibility from Sequence

Conformational Strain Indicated by Ramachandran Angles for the Protein Backbone Is Only Weakly Related to the Flexibility

Same but not alike: Structure, flexibility and energetics of domains in multi-domain proteins are influenced by the presence of other domains

Transient association between proteins elicits alteration of dynamics at sites far away from interfaces

Structural and evolutionary exploration of the IL-3 family and its alpha subunit receptors

A Dominant Mutation in the Gene Encoding the Erythroid Transcription Factor KLF1 Causes a Congenital Dyserythropoietic Anemia

A Perspective on the (Rise and Fall of) Protein β-Turns

Predicting protein flexibility through the prediction of local structures

Structural Space of the Duffy Antigen/Receptor for Chemokines’ Intrinsically Disordered Ectodomain 1 Explored by Temperature Replica-Exchange Molecular Dynamics Simulations

HumanLectome, an update of UniLectin for the annotation and prediction of human lectins

SWORD2: hierarchical analysis of protein 3D structures

CALR-ETdb, the database of calreticulin variants diversity in essential thrombocythemia

PYTHIA: Deep Learning Approach for Local Protein Conformation Prediction

Analysis of Protein Disorder Predictions in the Light of a Protein Structural Alphabet

Insights into Comparative Modeling of VHH Domains

Investigating the Product Profiles and Structural Relationships of New Levansucrases with Conventional and Non-Conventional Substrates

Accurate Representation of Protein-Ligand Structural Diversity in the Protein Data Bank (PDB)

A Review of the Literature Organized Into a New Database: RHeference

VHH Structural Modelling Approaches: A Critical Review

Benchmarking the PEPOP methods for mimicking discontinuous epitopes

Investigation of the impact of PTMs on the protein backbone conformation

Cis–trans isomerization of omega dihedrals in proteins

PredyFlexy: flexibility and local structure prediction from sequence

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