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NMR probing of invisible excited states using selectively labeled RNAs

Journal of biomolecular NMR, 2018-07, Vol.71 (3), p.165-172

2018

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CCR5 RNA Pseudoknots: Residue and Site‐Specific Labeling correlate Internal Motions with microRNA Binding

Chemistry : a European journal, 2018-04, Vol.24 (21), p.5462-5468

2018

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Synthesis of [7-15N]-GTPs for RNA structure and dynamics by NMR spectroscopy

Monatshefte für Chemie, 2022, Vol.153 (3), p.293-299

2022

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A magnesium-induced triplex pre-organizes the SAM-II riboswitch

PLoS computational biology, 2017-03, Vol.13 (3), p.e1005406-e1005406

2017

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Key labeling technologies to tackle sizeable problems in RNA structural biology

International Journal of Molecular Sciences, 2008-07, Vol.9 (7), p.1214-1240

Dayie, Kwaku T

2008

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Regio-Selective Chemical-Enzymatic Synthesis of Pyrimidine Nucleotides Facilitates RNA Structure and Dynamics Studies

Chembiochem : a European journal of chemical biology, 2014-07, Vol.15 (11), p.1573-1577

2014

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Synthesis of a biotinylated photocleavable nucleotide monophosphate for the preparation of natively folded RNAs

Methods in enzymology, 2014, Vol.549, p.115

2014

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SAM-II Riboswitch Samples at least Two Conformations in Solution in the Absence of Ligand: Implications for Recognition

Angewandte Chemie (International ed.), 2016-02, Vol.55 (8), p.2724-2727

International ed. in English, 2016

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Probing Adenine Rings and Backbone Linkages Using Base Specific Isotope-Edited Raman Spectroscopy: Application to Group II Intron Ribozyme Domain V

Biochemistry (Easton), 2010-04, Vol.49 (16), p.3427-3435

2010

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Multiple conformations of SAM-II riboswitch detected with SAXS and NMR spectroscopy

Nucleic acids research, 2012-04, Vol.40 (7), p.3117

2012

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Nanomolar fluorescent detection of c-di-GMP using a modular aptamer strategy

Chemical communications (Cambridge, England), 2012-09, Vol.48 (72), p.9059-9061

2012

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Deriving quantitative dynamics information for proteins and RNAs using ROTDIF with a graphical user interface

Journal of biomolecular NMR, 2013-12, Vol.57 (4), p.333-352

2013

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Chemo-enzymatic labeling for rapid assignment of RNA molecules

Methods (San Diego, Calif.), 2016-07, Vol.103, p.11-17

2016

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Chemo-enzymatic synthesis of site-specific isotopically labeled nucleotides for use in NMR resonance assignment, dynamics and structural characterizations

Nucleic acids research, 2016-04, Vol.44 (6), p.e52

2016

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Solution NMR readily reveals distinct structural folds and interactions in doubly 13C- and 19F-labeled RNAs

Science advances, 2020-10, Vol.6 (41)

2020

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Stable isotope-labeled RNA phosphoramidites to facilitate dynamics by NMR

Methods in enzymology, 2015, Vol.565, p.461

2015

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In vivo, large-scale preparation of uniformly (15)N- and site-specifically (13)C-labeled homogeneous, recombinant RNA for NMR studies

Methods in enzymology, 2015, Vol.565, p.495

2015

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A glimpse into the active site of a group II intron and maybe the spliceosome, too

RNA (Cambridge), 2008-09, Vol.14 (9), p.1697-1703

2008

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E88, a new cyclic-di-GMP class I riboswitch aptamer from Clostridium tetani, has a similar fold to the prototypical class I riboswitch, Vc2, but differentially binds to c-di-GMP analogs

Molecular bioSystems, 2014-01, Vol.1 (3), p.384-39

2014

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Solution NMR readily reveals distinct structural folds and interactions in doubly 13 C- and 19 F-labeled RNAs

Science advances, 2020-10, Vol.6 (41)

2020

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Site-specific labeling of nucleotides for making RNA for high resolution NMR studies using an E. coli strain disabled in the oxidative pentose phosphate pathway

Journal of biomolecular NMR, 2010-05, Vol.47 (1), p.19-31

2010

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RNAs synthesized using photocleavable biotinylated nucleotides have dramatically improved catalytic efficiency

Nucleic acids research, 2011-10, Vol.39 (19), p.8559

2011

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Differential binding of 2'-biotinylated analogs of c-di-GMP with c-di-GMP riboswitches and binding proteins

Molecular bioSystems, 2012-03, Vol.8 (3), p.772-778

2012

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Selective binding of 2'-F-c-di-GMP to Ct-E88 and Cb-E43, new class I riboswitches from Clostridium tetani and Clostridium botulinum respectively

Molecular bioSystems, 2013-01, Vol.9 (6), p.1535-1539

2013

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Chemo-enzymatic synthesis of selectively ¹³C/¹⁵N-labeled RNA for NMR structural and dynamics studies

Methods in enzymology, 2014, Vol.549, p.133

2014

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NMR probing of invisible excited states using selectively labeled RNAs

CCR5 RNA Pseudoknots: Residue and Site‐Specific Labeling correlate Internal Motions with microRNA Binding

Synthesis of [7-15N]-GTPs for RNA structure and dynamics by NMR spectroscopy

A magnesium-induced triplex pre-organizes the SAM-II riboswitch

Key labeling technologies to tackle sizeable problems in RNA structural biology

Regio-Selective Chemical-Enzymatic Synthesis of Pyrimidine Nucleotides Facilitates RNA Structure and Dynamics Studies

Synthesis of a biotinylated photocleavable nucleotide monophosphate for the preparation of natively folded RNAs

SAM-II Riboswitch Samples at least Two Conformations in Solution in the Absence of Ligand: Implications for Recognition

Probing Adenine Rings and Backbone Linkages Using Base Specific Isotope-Edited Raman Spectroscopy: Application to Group II Intron Ribozyme Domain V

Multiple conformations of SAM-II riboswitch detected with SAXS and NMR spectroscopy

Nanomolar fluorescent detection of c-di-GMP using a modular aptamer strategy

Deriving quantitative dynamics information for proteins and RNAs using ROTDIF with a graphical user interface

Chemo-enzymatic labeling for rapid assignment of RNA molecules

Chemo-enzymatic synthesis of site-specific isotopically labeled nucleotides for use in NMR resonance assignment, dynamics and structural characterizations

Solution NMR readily reveals distinct structural folds and interactions in doubly 13C- and 19F-labeled RNAs

Stable isotope-labeled RNA phosphoramidites to facilitate dynamics by NMR

In vivo, large-scale preparation of uniformly (15)N- and site-specifically (13)C-labeled homogeneous, recombinant RNA for NMR studies

A glimpse into the active site of a group II intron and maybe the spliceosome, too

E88, a new cyclic-di-GMP class I riboswitch aptamer from Clostridium tetani, has a similar fold to the prototypical class I riboswitch, Vc2, but differentially binds to c-di-GMP analogs

Solution NMR readily reveals distinct structural folds and interactions in doubly 13 C- and 19 F-labeled RNAs

Site-specific labeling of nucleotides for making RNA for high resolution NMR studies using an E. coli strain disabled in the oxidative pentose phosphate pathway

RNAs synthesized using photocleavable biotinylated nucleotides have dramatically improved catalytic efficiency

Differential binding of 2'-biotinylated analogs of c-di-GMP with c-di-GMP riboswitches and binding proteins

Selective binding of 2'-F-c-di-GMP to Ct-E88 and Cb-E43, new class I riboswitches from Clostridium tetani and Clostridium botulinum respectively

Chemo-enzymatic synthesis of selectively ¹³C/¹⁵N-labeled RNA for NMR structural and dynamics studies

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