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Beyond differential expression: the quest for causal mutations and effector molecules

BMC genomics, 2012-07, Vol.13 (1), p.356-356

2012

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A differential wiring analysis of expression data correctly identifies the gene containing the causal mutation

PLoS computational biology, 2009-05, Vol.5 (5), p.e1000382-e1000382

2009

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Genome Wide Survey of SNP Variation Reveals the Genetic Structure of Sheep Breeds

PloS one, 2009-03, Vol.4 (3), p.e4668-e4668

2009

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Fast fourier transform: A Niche, but critical strategy in optimizing impression evidence

Journal of forensic science and medicine, 2018-10, Vol.4 (4), p.192-196

Dalrymple, Brian

2018

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A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach

Genome Research, 2008-06, Vol.18 (6), p.957-964

2008

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Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data

Bioinformatics, 2010-04, Vol.26 (7), p.896-904

2010

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Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection

PLoS biology, 2012-02, Vol.10 (2), p.e1001258-e1001258

2012

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Forensic Digital Image Processing: Optimization of Impression Evidence

1st edition., 2018

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Transcriptome analysis of cattle muscle identifies potential markers for skeletal muscle growth rate and major cell types

BMC genomics, 2015-03, Vol.16 (1), p.177-177, Article 177

2015

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Growing Community Health Literacy through Libraries: Sharing Global Perspectives

1, 2020

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Inferring the Transcriptional Landscape of Bovine Skeletal Muscle by Integrating Co-Expression Networks

PloS one, 2009-10, Vol.4 (10), p.e7249-e7249

2009

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Epithelial, metabolic and innate immunity transcriptomic signatures differentiating the rumen from other sheep and mammalian gastrointestinal tract tissues

PeerJ (San Francisco, CA), 2016-03, Vol.4, p.e1762-e1762, Article e1762

2016

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A comparison of transcriptomic patterns measured in the skin of Chinese fine and coarse wool sheep breeds

Scientific reports, 2017-10, Vol.7 (1), p.14301-12, Article 14301

2017

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Origin, Evolution, and Biological Role of miRNA Cluster in DLK-DIO3 Genomic Region in Placental Mammals

Molecular biology and evolution, 2008-05, Vol.25 (5), p.939-948

2008

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A Universal Protein-Protein Interaction Motif in the Eubacterial DNA Replication and Repair Systems

Proceedings of the National Academy of Sciences - PNAS, 2001-09, Vol.98 (20), p.11627-11632

2001

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Porcine tissue-specific regulatory networks derived from meta-analysis of the transcriptome

PloS one, 2012-09, Vol.7 (9), p.e46159-e46159

2012

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A divergent Artiodactyl MYADM-like repeat is associated with erythrocyte traits and weight of lamb weaned in domestic sheep

PloS one, 2013-08, Vol.8 (8), p.e74700-e74700

2013

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A gene expression estimator of intramuscular fat percentage for use in both cattle and sheep

Journal of animal science and biotechnology, 2014-06, Vol.5 (4), p.379-390, Article 35

2014

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Gene network analysis identifies rumen epithelial cell proliferation, differentiation and metabolic pathways perturbed by diet and correlated with methane production

Scientific reports, 2016-12, Vol.6 (1), p.39022-39022, Article 39022

2016

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Genome-wide patterns of promoter sharing and co-expression in bovine skeletal muscle

BMC genomics, 2011-01, Vol.12 (1), p.23-23, Article 23

2011

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Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics, and epigenetics data

Gigascience, 2018-03, Vol.7 (3), p.1

2018

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Modes of genetic adaptations underlying functional innovations in the rumen

Science China. Life sciences, 2021, Vol.64 (1), p.1-21

2021

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Eukaryotic evolutionary transitions are associated with extreme codon bias in functionally-related proteins

PloS one, 2011-09, Vol.6 (9), p.e25457-e25457

2011

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Using comparative genomics to reorder the human genome sequence into a virtual sheep genome

Genome biology, 2007-01, Vol.8 (7), p.R152-R152

2007

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Across-Experiment Transcriptomics of Sheep Rumen Identifies Expression of Lipid/Oxo-Acid Metabolism and Muscle Cell Junction Genes Associated With Variation in Methane-Related Phenotypes

Frontiers in genetics, 2018-08, Vol.9, p.330-330

2018

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Beyond differential expression: the quest for causal mutations and effector molecules

A differential wiring analysis of expression data correctly identifies the gene containing the causal mutation

Genome Wide Survey of SNP Variation Reveals the Genetic Structure of Sheep Breeds

Fast fourier transform: A Niche, but critical strategy in optimizing impression evidence

A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach

Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data

Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection

Forensic Digital Image Processing: Optimization of Impression Evidence

Transcriptome analysis of cattle muscle identifies potential markers for skeletal muscle growth rate and major cell types

Growing Community Health Literacy through Libraries: Sharing Global Perspectives

Inferring the Transcriptional Landscape of Bovine Skeletal Muscle by Integrating Co-Expression Networks

Epithelial, metabolic and innate immunity transcriptomic signatures differentiating the rumen from other sheep and mammalian gastrointestinal tract tissues

A comparison of transcriptomic patterns measured in the skin of Chinese fine and coarse wool sheep breeds

Origin, Evolution, and Biological Role of miRNA Cluster in DLK-DIO3 Genomic Region in Placental Mammals

A Universal Protein-Protein Interaction Motif in the Eubacterial DNA Replication and Repair Systems

Porcine tissue-specific regulatory networks derived from meta-analysis of the transcriptome

A divergent Artiodactyl MYADM-like repeat is associated with erythrocyte traits and weight of lamb weaned in domestic sheep

A gene expression estimator of intramuscular fat percentage for use in both cattle and sheep

Gene network analysis identifies rumen epithelial cell proliferation, differentiation and metabolic pathways perturbed by diet and correlated with methane production

Genome-wide patterns of promoter sharing and co-expression in bovine skeletal muscle

Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics, and epigenetics data

Modes of genetic adaptations underlying functional innovations in the rumen

Eukaryotic evolutionary transitions are associated with extreme codon bias in functionally-related proteins

Using comparative genomics to reorder the human genome sequence into a virtual sheep genome

Across-Experiment Transcriptomics of Sheep Rumen Identifies Expression of Lipid/Oxo-Acid Metabolism and Muscle Cell Junction Genes Associated With Variation in Methane-Related Phenotypes

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