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A transformer architecture based on BERT and 2D convolutional neural network to identify DNA enhancers from sequence information

Briefings in bioinformatics, 2021-09, Vol.22 (5)

2021

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A sequence-based prediction of Kruppel-like factors proteins using XGBoost and optimized features

Gene, 2021-06, Vol.787, p.145643-145643, Article 145643

2021

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Using multiple convolutional window scanning of convolutional neural network for an efficient prediction of ATP‐binding sites in transport proteins

Proteins, structure, function, and bioinformatics, 2022-07, Vol.90 (7), p.1486-1492

2022

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FAD-BERT: Improved prediction of FAD binding sites using pre-training of deep bidirectional transformers

Computers in biology and medicine, 2021-04, Vol.131, p.104258-104258, Article 104258

2021

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Development of a fast and simple method for the isolation of superparamagnetic iron oxide nanoparticles protein corona from protein-rich matrices

Journal of colloid and interface science, 2024-04, Vol.659, p.503-519

2024

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Addressing data imbalance problems in ligand-binding site prediction using a variational autoencoder and a convolutional neural network

Briefings in bioinformatics, 2021-11, Vol.22 (6)

2021

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MFPS_CNN: Multi‐filter Pattern Scanning from Position‐specific Scoring Matrix with Convolutional Neural Network for Efficient Prediction of Ion Transporters

Molecular informatics, 2022-09, Vol.41 (9), p.e2100271-n/a

2022

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Using k-mer embeddings learned from a Skip-gram based neural network for building a cross-species DNA N6-methyladenine site prediction model

Plant molecular biology, 2021-12, Vol.107 (6), p.533-542

2021

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Saturated RISE Feedback Control for Uncertain Nonlinear MacPherson Active Suspension System to Improve Ride Comfort

Journal of dynamic systems, measurement, and control, 2021-01, Vol.143 (1)

2021

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Probing the glycans accessibility in the nanoparticle biomolecular corona

Journal of colloid and interface science, 2022-05, Vol.613, p.563-574

2022

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Nanoparticle Biomolecular Corona-Based Enrichment of Plasma Glycoproteins for N‑Glycan Profiling and Application in Biomarker Discovery

ACS nano, 2022-04, Vol.16 (4), p.5463-5475

2022

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Using word embedding technique to efficiently represent protein sequences for identifying substrate specificities of transporters

Analytical biochemistry, 2019-07, Vol.577, p.73-81

2019

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Prediction of ATP-binding sites in membrane proteins using a two-dimensional convolutional neural network

Journal of molecular graphics & modelling, 2019-11, Vol.92, p.86-93

2019

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Using Language Representation Learning Approach to Efficiently Identify Protein Complex Categories in Electron Transport Chain

Molecular informatics, 2020-10, Vol.39 (10), p.e2000033-n/a

2020

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The impact of exchange rate volatility on exports in Vietnam: A bounds testing approach

Journal of risk and financial management, 2019-03, Vol.12 (1), p.1-14

2019

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GT-Finder: Classify the family of glucose transporters with pre-trained BERT language models

Computers in biology and medicine, 2021-04, Vol.131, p.104259-104259, Article 104259

2021

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Type 2 Diabetes Mellitus (T2DM) and Carbohydrate Metabolism in Relation to T2DM from Endocrinology, Neurophysiology, Molecular Biology, and Biochemistry Perspectives

Evidence-based complementary and alternative medicine, 2022, Vol.2022, p.1708769-11

2022

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Identification of physicochemical properties that modulate nanoparticle aggregation in blood

Beilstein journal of nanotechnology, 2020, Vol.11 (1), p.550-567

2020

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Comparison of two active case-finding strategies for community-based diagnosis of symptomatic smear-positive tuberculosis and control of infectious tuberculosis in Harare, Zimbabwe (DETECTB): a cluster-randomised trial

The Lancet (British edition), 2010-10, Vol.376 (9748), p.1244-1253

2010

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A Critical Scrutiny on Liposomal Nanoparticles Drug Carriers as Modelled by Topotecan Encapsulation and Release in Treating Cancer

Evidence-based complementary and alternative medicine, 2022, Vol.2022, p.7702512-7

2022

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Elevated concentrations of Neu5Ac and Neu5,9Ac2 in human plasma: potential biomarkers of cardiovascular disease

Glycoconjugate journal, 2023-12, Vol.40 (6), p.645-654

2023

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An Extensive Examination of Discovering 5-Methylcytosine Sites in Genome-Wide DNA Promoters Using Machine Learning Based Approaches

IEEE/ACM transactions on computational biology and bioinformatics, 2022-01, Vol.19 (1), p.87-94

2022

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Interplay between Cellular Uptake, Intracellular Localization and the Cell Death Mechanism in Triphenylamine-Mediated Photoinduced Cell Death

Scientific reports, 2020-04, Vol.10 (1), p.6881, Article 6881

2020

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Towards an Operational SAR-Based Rice Monitoring System in Asia: Examples from 13 Demonstration Sites across Asia in the RIICE Project

Remote sensing (Basel, Switzerland), 2014-11, Vol.6 (11), p.10773-10812

2014

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Orographic Effect and the Opposite Trend of Rainfall in Central Vietnam

Advances in meteorology, 2023-03, Vol.2023, p.1-12

2023

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A transformer architecture based on BERT and 2D convolutional neural network to identify DNA enhancers from sequence information

A sequence-based prediction of Kruppel-like factors proteins using XGBoost and optimized features

Using multiple convolutional window scanning of convolutional neural network for an efficient prediction of ATP‐binding sites in transport proteins

FAD-BERT: Improved prediction of FAD binding sites using pre-training of deep bidirectional transformers

Development of a fast and simple method for the isolation of superparamagnetic iron oxide nanoparticles protein corona from protein-rich matrices

Addressing data imbalance problems in ligand-binding site prediction using a variational autoencoder and a convolutional neural network

MFPS_CNN: Multi‐filter Pattern Scanning from Position‐specific Scoring Matrix with Convolutional Neural Network for Efficient Prediction of Ion Transporters

Using k-mer embeddings learned from a Skip-gram based neural network for building a cross-species DNA N6-methyladenine site prediction model

Saturated RISE Feedback Control for Uncertain Nonlinear MacPherson Active Suspension System to Improve Ride Comfort

Probing the glycans accessibility in the nanoparticle biomolecular corona

Nanoparticle Biomolecular Corona-Based Enrichment of Plasma Glycoproteins for N‑Glycan Profiling and Application in Biomarker Discovery

Using word embedding technique to efficiently represent protein sequences for identifying substrate specificities of transporters

Prediction of ATP-binding sites in membrane proteins using a two-dimensional convolutional neural network

Using Language Representation Learning Approach to Efficiently Identify Protein Complex Categories in Electron Transport Chain

The impact of exchange rate volatility on exports in Vietnam: A bounds testing approach

GT-Finder: Classify the family of glucose transporters with pre-trained BERT language models

Type 2 Diabetes Mellitus (T2DM) and Carbohydrate Metabolism in Relation to T2DM from Endocrinology, Neurophysiology, Molecular Biology, and Biochemistry Perspectives

Identification of physicochemical properties that modulate nanoparticle aggregation in blood

Comparison of two active case-finding strategies for community-based diagnosis of symptomatic smear-positive tuberculosis and control of infectious tuberculosis in Harare, Zimbabwe (DETECTB): a cluster-randomised trial

A Critical Scrutiny on Liposomal Nanoparticles Drug Carriers as Modelled by Topotecan Encapsulation and Release in Treating Cancer

Elevated concentrations of Neu5Ac and Neu5,9Ac2 in human plasma: potential biomarkers of cardiovascular disease

An Extensive Examination of Discovering 5-Methylcytosine Sites in Genome-Wide DNA Promoters Using Machine Learning Based Approaches

Interplay between Cellular Uptake, Intracellular Localization and the Cell Death Mechanism in Triphenylamine-Mediated Photoinduced Cell Death

Towards an Operational SAR-Based Rice Monitoring System in Asia: Examples from 13 Demonstration Sites across Asia in the RIICE Project

Orographic Effect and the Opposite Trend of Rainfall in Central Vietnam

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