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Karyotype Stability and Unbiased Fractionation in the Paleo-Allotetraploid Cucurbita Genomes

Molecular plant, 2017-10, Vol.10 (10), p.1293-1306

2017

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Phylogenetic Perspectives on the Origins of Nodulation

Molecular plant-microbe interactions, 2011-11, Vol.24 (11), p.1289-1295

Doyle, Jeff J

2011

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Chasing unicorns: Nodulation origins and the paradox of novelty

American journal of botany, 2016-11, Vol.103 (11), p.1865-1868

Doyle, Jeff J.

2016

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A Resurrected Scenario: Single Gain and Massive Loss of Nitrogen-Fixing Nodulation

Trends in plant science, 2019-01, Vol.24 (1), p.49-57

2019

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Cell types as species: Exploring a metaphor

Frontiers in plant science, 2022-08, Vol.13, p.868565-868565

Doyle, Jeff J.

2022

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Ploidy and Size at Multiple Scales in the Arabidopsis Sepal

The Plant cell, 2018-10, Vol.30 (10), p.2308-2329

2018

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Double trouble: taxonomy and definitions of polyploidy

The New phytologist, 2017-01, Vol.213 (2), p.487-493

2017

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Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes

Molecular biology and evolution, 2015-01, Vol.32 (1), p.193-210

2015

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Fifteen compelling open questions in plant cell biology

The Plant cell, 2022-01, Vol.34 (1), p.72-102

2022

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Variation in transcriptome size: are we getting the message?

Chromosoma, 2015-03, Vol.124 (1), p.27-43

2015

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Evolutionary genetics of genome merger and doubling in plants

Annual review of genetics, 2008-01, Vol.42 (1), p.443-461

2008

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Expression Partitioning of Duplicate Genes at Single Cell Resolution in Arabidopsis Roots

Frontiers in genetics, 2020-11, Vol.11, p.596150

2020

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rest of the iceberg. Legume diversity and evolution in a phylogenetic context

Plant physiology (Bethesda), 2003-03, Vol.131 (3), p.900-910

2003

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Widespread genome duplications throughout the history of flowering plants

Genome Research, 2006-06, Vol.16 (6), p.738-749

2006

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Expression-level support for gene dosage sensitivity in three Glycine subgenus Glycine polyploids and their diploid progenitors

The New phytologist, 2016-12, Vol.212 (4), p.1083-1093

2016

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The recipe for cytonuclear interaction begins with a superabundance of plastid and mitochondrial mRNAs

Proceedings of the National Academy of Sciences - PNAS, 2022-08, Vol.119 (34), p.e2211133119-e2211133119

Doyle, Jeff J

2022

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Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers

BMC genomics, 2017-05, Vol.18 (1), p.409-409, Article 409

2017

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Cercis : A Non-polyploid Genomic Relic Within the Generally Polyploid Legume Family

Frontiers in plant science, 2019-04, Vol.10, p.345-345

2019

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De novo transcriptome assembly of Pueraria montana var. lobata and Neustanthus phaseoloides for the development of eSSR and SNP markers: narrowing the US origin(s) of the invasive kudzu

BMC genomics, 2018-06, Vol.19 (1), p.439-17, Article 439

2018

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A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species

American journal of botany, 2012-02, Vol.99 (2), p.383-396

2012

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Quantifying whole transcriptome size, a prerequisite for understanding transcriptome evolution across species: an example from a plant allopolyploid

Genome biology and evolution, 2010, Vol.2, p.534-546

2010

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Multilocus estimation of divergence times and ancestral effective population sizes of Oryza species and implications for the rapid diversification of the genus

The New phytologist, 2013-06, Vol.198 (4), p.1155-1164

2013

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Robust Cytonuclear Coordination of Transcription in Nascent Arabidopsis thaliana Autopolyploids

Genes, 2020-01, Vol.11 (2), p.134

2020

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Population Dynamics Among six Major Groups of the Oryza rufipogon Species Complex, Wild Relative of Cultivated Asian Rice

Rice (New York, N.Y.), 2016-10, Vol.9 (1), p.56-56, Article 56

2016

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Whole‐Genome Sequence of Synthesized Allopolyploids in Cucumis Reveals Insights into the Genome Evolution of Allopolyploidization

Advanced science, 2021-05, Vol.8 (9), p.2004222-n/a

2021

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Karyotype Stability and Unbiased Fractionation in the Paleo-Allotetraploid Cucurbita Genomes

Phylogenetic Perspectives on the Origins of Nodulation

Chasing unicorns: Nodulation origins and the paradox of novelty

A Resurrected Scenario: Single Gain and Massive Loss of Nitrogen-Fixing Nodulation

Cell types as species: Exploring a metaphor

Ploidy and Size at Multiple Scales in the Arabidopsis Sepal

Double trouble: taxonomy and definitions of polyploidy

Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes

Fifteen compelling open questions in plant cell biology

Variation in transcriptome size: are we getting the message?

Evolutionary genetics of genome merger and doubling in plants

Expression Partitioning of Duplicate Genes at Single Cell Resolution in Arabidopsis Roots

rest of the iceberg. Legume diversity and evolution in a phylogenetic context

Widespread genome duplications throughout the history of flowering plants

Expression-level support for gene dosage sensitivity in three Glycine subgenus Glycine polyploids and their diploid progenitors

The recipe for cytonuclear interaction begins with a superabundance of plastid and mitochondrial mRNAs

Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers

Cercis : A Non-polyploid Genomic Relic Within the Generally Polyploid Legume Family

De novo transcriptome assembly of Pueraria montana var. lobata and Neustanthus phaseoloides for the development of eSSR and SNP markers: narrowing the US origin(s) of the invasive kudzu

A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species

Quantifying whole transcriptome size, a prerequisite for understanding transcriptome evolution across species: an example from a plant allopolyploid

Multilocus estimation of divergence times and ancestral effective population sizes of Oryza species and implications for the rapid diversification of the genus

Robust Cytonuclear Coordination of Transcription in Nascent Arabidopsis thaliana Autopolyploids

Population Dynamics Among six Major Groups of the Oryza rufipogon Species Complex, Wild Relative of Cultivated Asian Rice

Whole‐Genome Sequence of Synthesized Allopolyploids in Cucumis Reveals Insights into the Genome Evolution of Allopolyploidization

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