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Bioinformatics: An Introductory Textbook

1, 2023

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The role of auxin-cytokinin antagonism in plant-pathogen interactions

PLoS pathogens, 2012-11, Vol.8 (11), p.e1003026-e1003026

2012

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Carbon metabolism of intracellular bacterial pathogens and possible links to virulence

Nature reviews. Microbiology, 2010-06, Vol.8 (6), p.401-412

2010

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Development of Long Noncoding RNA-Based Strategies to Modulate Tissue Vascularization

Journal of the American College of Cardiology, 2015-11, Vol.66 (18), p.2005-2015

2015

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An orchestra of machine learning methods reveals landmarks in single-cell data exemplified with aging fibroblasts

PloS one, 2024-04, Vol.19 (4), p.e0302045-e0302045

2024

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Plant–Pathogen Maneuvering over Apoplastic Sugars

Trends in plant science, 2017-09, Vol.22 (9), p.740-743

2017

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Motif and conserved module analysis in DNA (promoters, enhancers) and RNA (lncRNA, mRNA) using AlModules

Scientific reports, 2022-10, Vol.12 (1), p.17588-17588, Article 17588

2022

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In Silico Studies Reveal Peramivir and Zanamivir as an Optimal Drug Treatment Even If H7N9 Avian Type Influenza Virus Acquires Further Resistance

Molecules (Basel, Switzerland), 2022-09, Vol.27 (18), p.5920

2022

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Eugenol Exerts Apoptotic Effect and Modulates the Sensitivity of HeLa Cells to Cisplatin and Radiation

Molecules (Basel, Switzerland), 2019-11, Vol.24 (21), p.3979

2019

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5.8S-28S rRNA interaction and HMM-based ITS2 annotation

Gene, 2009-02, Vol.430 (1), p.50-57

2009

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Klimapflanzen und biologische Wege zu negativen Kohlendioxidemissionen

Biospektrum, 2021-11, Vol.27 (7), p.769-772

2021

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Plasma steroid metabolome profiling for the diagnosis of adrenocortical carcinoma

European journal of endocrinology, 2019-02, Vol.180 (2), p.117-125

2019

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Analyzing pharmacological intervention points: A method to calculate external stimuli to switch between steady states in regulatory networks

PLoS computational biology, 2019-07, Vol.15 (7), p.e1007075-e1007075

2019

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Bioinformatik Am Beispiel des SARS-CoV2 Virus und der Covid19 Pandemie

1, 2023

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4SALE--a tool for synchronous RNA sequence and secondary structure alignment and editing

BMC bioinformatics, 2006-11, Vol.7 (1), p.498-498, Article 498

2006

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Comprehensive Flux Modeling of Chlamydia trachomatis Proteome and qRT-PCR Data Indicate Biphasic Metabolic Differences Between Elementary Bodies and Reticulate Bodies During Infection

Frontiers in microbiology, 2019-10, Vol.10, p.2350-2350

2019

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How to Steer and Control ERK and the ERK Signaling Cascade Exemplified by Looking at Cardiac Insufficiency

International journal of molecular sciences, 2019-05, Vol.20 (9), p.2179

2019

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An effective model of endogenous clocks and external stimuli determining circadian rhythms

Scientific reports, 2021-08, Vol.11 (1), p.16165-16165, Article 16165

2021

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Identifying functional modules in protein–protein interaction networks: an integrated exact approach

Bioinformatics, 2008-07, Vol.24 (13), p.i223-i231

2008

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The linear chromosome of the plant-pathogenic mycoplasma 'Candidatus Phytoplasma mali'

BMC genomics, 2008-06, Vol.9 (1), p.306-306

2008

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Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE

BMC research notes, 2008-10, Vol.1 (1), p.91-91

2008

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Distinguishing species

RNA (Cambridge), 2007-09, Vol.13 (9), p.1469-1472

2007

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BioNet: an R-Package for the functional analysis of biological networks

Bioinformatics, 2010-04, Vol.26 (8), p.1129-1130

2010

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Integrative functional genomics decodes herpes simplex virus 1

Nature communications, 2020-04, Vol.11 (1), p.2038-14, Article 2038

2020

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Software JimenaE allows efficient dynamic simulations of Boolean networks, centrality and system state analysis

Scientific reports, 2023-02, Vol.13 (1), p.1855-1855, Article 1855

2023

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Bioinformatics: An Introductory Textbook

The role of auxin-cytokinin antagonism in plant-pathogen interactions

Carbon metabolism of intracellular bacterial pathogens and possible links to virulence

Development of Long Noncoding RNA-Based Strategies to Modulate Tissue Vascularization

An orchestra of machine learning methods reveals landmarks in single-cell data exemplified with aging fibroblasts

Plant–Pathogen Maneuvering over Apoplastic Sugars

Motif and conserved module analysis in DNA (promoters, enhancers) and RNA (lncRNA, mRNA) using AlModules

In Silico Studies Reveal Peramivir and Zanamivir as an Optimal Drug Treatment Even If H7N9 Avian Type Influenza Virus Acquires Further Resistance

Eugenol Exerts Apoptotic Effect and Modulates the Sensitivity of HeLa Cells to Cisplatin and Radiation

5.8S-28S rRNA interaction and HMM-based ITS2 annotation

Klimapflanzen und biologische Wege zu negativen Kohlendioxidemissionen

Plasma steroid metabolome profiling for the diagnosis of adrenocortical carcinoma

Analyzing pharmacological intervention points: A method to calculate external stimuli to switch between steady states in regulatory networks

Bioinformatik Am Beispiel des SARS-CoV2 Virus und der Covid19 Pandemie

4SALE--a tool for synchronous RNA sequence and secondary structure alignment and editing

Comprehensive Flux Modeling of Chlamydia trachomatis Proteome and qRT-PCR Data Indicate Biphasic Metabolic Differences Between Elementary Bodies and Reticulate Bodies During Infection

How to Steer and Control ERK and the ERK Signaling Cascade Exemplified by Looking at Cardiac Insufficiency

An effective model of endogenous clocks and external stimuli determining circadian rhythms

Identifying functional modules in protein–protein interaction networks: an integrated exact approach

The linear chromosome of the plant-pathogenic mycoplasma 'Candidatus Phytoplasma mali'

Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE

Distinguishing species

BioNet: an R-Package for the functional analysis of biological networks

Integrative functional genomics decodes herpes simplex virus 1

Software JimenaE allows efficient dynamic simulations of Boolean networks, centrality and system state analysis

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