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Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins

Bioinformatics, 2016-05, Vol.32 (10), p.1527-1535

2016

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iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

Nature structural & molecular biology, 2010-07, Vol.17 (7), p.909

2010

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Characterizing the RNA targets and position-dependent splicing regulation by TDP-43

Nature neuroscience, 2011-04, Vol.14 (4), p.452-458

2011

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The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs

Nature communications, 2015-12, Vol.6 (1), p.10127-10127, Article 10127

2015

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Yeast as a cell factory: current state and perspectives

Microbial cell factories, 2015-06, Vol.14 (1), p.94-94, Article 94

2015

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iCLIP predicts the dual splicing effects of TIA-RNA interactions

PLoS biology, 2010-10, Vol.8 (10), p.e1000530

2010

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Deep sequencing of virus-derived small interfering RNAs and RNA from viral particles shows highly similar mutational landscapes of a plant virus population

Journal of virology, 2015-05, Vol.89 (9), p.4760-4769

2015

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Promiscuous RNA binding ensures effective encapsidation of APOBEC3 proteins by HIV-1

PLoS pathogens, 2015-01, Vol.11 (1), p.e1004609-e1004609

2015

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RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes

Genome Biology, 2012-01, Vol.13 (3), p.R17-R17

2012

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High-Resolution RNA Maps Suggest Common Principles of Splicing and Polyadenylation Regulation by TDP-43

Cell reports (Cambridge), 2017-05, Vol.19 (5), p.1056-1067

2017

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Differential expression of microRNAs and other small RNAs in muscle tissue of patients with ALS and healthy age-matched controls

Scientific reports, 2018-04, Vol.8 (1), p.5609-15, Article 5609

2018

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Recursive splicing in long vertebrate genes

Nature (London), 2015-05, Vol.521 (7552), p.371-375

2015

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CELF4 regulates translation and local abundance of a vast set of mRNAs, including genes associated with regulation of synaptic function

PLoS genetics, 2012-11, Vol.8 (11), p.e1003067-e1003067

2012

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The RNA-binding protein HuR is essential for the B cell antibody response

Nature immunology, 2015-04, Vol.16 (4), p.415

2015

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Tia1 dependent regulation of mRNA subcellular location and translation controls p53 expression in B cells

Nature communications, 2017-09, Vol.8 (1), p.530-16, Article 530

2017

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Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain

Scientific reports, 2012-08, Vol.2, p.603-603

2012

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Rbfox2-Coordinated Alternative Splicing of Mef2d and Rock2 Controls Myoblast Fusion during Myogenesis

Molecular cell, 2014-08, Vol.55 (4), p.592-603

2014

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Analysis of alternative splicing associated with aging and neurodegeneration in the human brain

Genome research, 2011-10, Vol.21 (10), p.1572

2011

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Identification of novel genes involved in neutral lipid storage by quantitative trait loci analysis of Saccharomyces cerevisiae

BMC genomics, 2021-02, Vol.22 (1), p.110-110, Article 110

2021

Volltextzugriff (PDF)

Aubergine iCLIP Reveals piRNA-Dependent Decay of mRNAs Involved in Germ Cell Development in the Early Embryo

Cell reports (Cambridge), 2015-08, Vol.12 (7), p.1205-1216

2015

Volltextzugriff (PDF)

An ancient germ cell-specific RNA-binding protein protects the germline from cryptic splice site poisoning

eLife, 2019-01, Vol.8

2019

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Heterogeneous computing architecture for fast detection of SNP-SNP interactions

BMC bioinformatics, 2014-06, Vol.15 (1), p.216-216, Article 216

2014

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Insights into the design and interpretation of iCLIP experiments

Genome Biology, 2017-01, Vol.18 (1), p.7-7, Article 7

2017

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Identification of RNA-binding domains of RNA-binding proteins in cultured cells on a system-wide scale with RBDmap

Nature protocols, 2017-12, Vol.12 (12), p.2447-2464

2017

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Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions

Genome biology, 2012-01, Vol.13 (8), p.R67-R67

2012

Volltextzugriff (PDF)

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Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

Characterizing the RNA targets and position-dependent splicing regulation by TDP-43

The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs

Yeast as a cell factory: current state and perspectives

iCLIP predicts the dual splicing effects of TIA-RNA interactions

Deep sequencing of virus-derived small interfering RNAs and RNA from viral particles shows highly similar mutational landscapes of a plant virus population

Promiscuous RNA binding ensures effective encapsidation of APOBEC3 proteins by HIV-1

RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes

High-Resolution RNA Maps Suggest Common Principles of Splicing and Polyadenylation Regulation by TDP-43

Differential expression of microRNAs and other small RNAs in muscle tissue of patients with ALS and healthy age-matched controls

Recursive splicing in long vertebrate genes

CELF4 regulates translation and local abundance of a vast set of mRNAs, including genes associated with regulation of synaptic function

The RNA-binding protein HuR is essential for the B cell antibody response

Tia1 dependent regulation of mRNA subcellular location and translation controls p53 expression in B cells

Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain

Rbfox2-Coordinated Alternative Splicing of Mef2d and Rock2 Controls Myoblast Fusion during Myogenesis

Analysis of alternative splicing associated with aging and neurodegeneration in the human brain

Identification of novel genes involved in neutral lipid storage by quantitative trait loci analysis of Saccharomyces cerevisiae

Aubergine iCLIP Reveals piRNA-Dependent Decay of mRNAs Involved in Germ Cell Development in the Early Embryo

An ancient germ cell-specific RNA-binding protein protects the germline from cryptic splice site poisoning

Heterogeneous computing architecture for fast detection of SNP-SNP interactions

Insights into the design and interpretation of iCLIP experiments

Identification of RNA-binding domains of RNA-binding proteins in cultured cells on a system-wide scale with RBDmap

Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions

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