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A review of atlas-based segmentation for magnetic resonance brain images

Computer methods and programs in biomedicine, 2011-12, Vol.104 (3), p.e158-e177

2011

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A New Advanced MRI Biomarker for Remyelinated Lesions in Multiple Sclerosis

Annals of neurology, 2022-09, Vol.92 (3), p.486-502

2022

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Automated template-based brain localization and extraction for fetal brain MRI reconstruction

NeuroImage (Orlando, Fla.), 2017-07, Vol.155, p.460-472

2017

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Quantification in Musculoskeletal Imaging Using Computational Analysis and Machine Learning: Segmentation and Radiomics

Seminars in musculoskeletal radiology, 2020-02, Vol.24 (1), p.50-64

2020

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An automatic multi-tissue human fetal brain segmentation benchmark using the Fetal Tissue Annotation Dataset

Scientific data, 2021-07, Vol.8 (1), p.167-167, Article 167

2021

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In-vivo probabilistic atlas of human thalamic nuclei based on diffusion- weighted magnetic resonance imaging

Scientific data, 2018-11, Vol.5 (1), p.180270-11, Article 180270

2018

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A Fetal Brain magnetic resonance Acquisition Numerical phantom (FaBiAN)

Scientific reports, 2022-05, Vol.12 (1), p.8682-8682, Article 8682

2022

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Improved susceptibility‐weighted imaging for high contrast and resolution thalamic nuclei mapping at 7T

Magnetic resonance in medicine, 2020-09, Vol.84 (3), p.1218-1234

2020

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Automated detection of white matter and cortical lesions in early stages of multiple sclerosis

Journal of magnetic resonance imaging, 2016-06, Vol.43 (6), p.1445-1454

2016

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Automated Detection and Segmentation of Multiple Sclerosis Lesions Using Ultra-High-Field MP2RAGE

Investigative radiology, 2019-06, Vol.54 (6), p.356-364

2019

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Domain Generalization in Fetal Brain MRI Segmentation with Multi-Reconstruction Augmentation

2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 2023, p.1-5

2023

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Longitudinal analysis of white matter and cortical lesions in multiple sclerosis

NeuroImage clinical, 2019-01, Vol.23, p.101938, Article 101938

2019

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Comparison of MRI-based automated segmentation methods and functional neurosurgery targeting with direct visualization of the Ventro-intermediate thalamic nucleus at 7T

Scientific reports, 2019-02, Vol.9 (1), p.1119-1119, Article 1119

2019

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Partial‐volume modeling reveals reduced gray matter in specific thalamic nuclei early in the time course of psychosis and chronic schizophrenia

Human brain mapping, 2020-10, Vol.41 (14), p.4041-4061

2020

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Multiple sclerosis cortical lesion detection with deep learning at ultra‐high‐field MRI

NMR in biomedicine, 2022-08, Vol.35 (8), p.e4730-n/a

2022

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Assessment of fetal corpus callosum biometry by 3D super-resolution reconstructed T2-weighted magnetic resonance imaging

Frontiers in neurology, 2024-03, Vol.15, p.1358741-1358741

2024

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Multi-channel MRI segmentation of eye structures and tumors using patient-specific features

PloS one, 2017-03, Vol.12 (3), p.e0173900-e0173900

2017

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Cortical lesions, central vein sign, and paramagnetic rim lesions in multiple sclerosis: Emerging machine learning techniques and future avenues

NeuroImage clinical, 2022-01, Vol.36, p.103205-103205, Article 103205

2022

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RimNet: A deep 3D multimodal MRI architecture for paramagnetic rim lesion assessment in multiple sclerosis

NeuroImage clinical, 2020-01, Vol.28, p.102412-102412, Article 102412

2020

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How far MS lesion detection and segmentation are integrated into the clinical workflow? A systematic review

NeuroImage clinical, 2023-01, Vol.39, p.103491-103491, Article 103491

2023

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BMAT: An open-source BIDS managing and analysis tool

NeuroImage clinical, 2022-01, Vol.36, p.103252-103252, Article 103252

2022

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A comparative assessment of myelin-sensitive measures in multiple sclerosis patients and healthy subjects

NeuroImage clinical, 2022-01, Vol.36, p.103177-103177, Article 103177

2022

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BigBrain-MR: a new digital phantom with anatomically-realistic magnetic resonance properties at 100-µm resolution for magnetic resonance methods development

NeuroImage (Orlando, Fla.), 2023-06, Vol.273, p.120074-120074, Article 120074

2023

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GAMER MRI: Gated-attention mechanism ranking of multi-contrast MRI in brain pathology

NeuroImage clinical, 2021-01, Vol.29, p.102522-102522, Article 102522

2021

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Myelin and axon pathology in multiple sclerosis assessed by myelin water and multi-shell diffusion imaging

Brain (London, England : 1878), 2021-07, Vol.144 (6), p.1684-1696

2021

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A review of atlas-based segmentation for magnetic resonance brain images

A New Advanced MRI Biomarker for Remyelinated Lesions in Multiple Sclerosis

Automated template-based brain localization and extraction for fetal brain MRI reconstruction

Quantification in Musculoskeletal Imaging Using Computational Analysis and Machine Learning: Segmentation and Radiomics

An automatic multi-tissue human fetal brain segmentation benchmark using the Fetal Tissue Annotation Dataset

In-vivo probabilistic atlas of human thalamic nuclei based on diffusion- weighted magnetic resonance imaging

A Fetal Brain magnetic resonance Acquisition Numerical phantom (FaBiAN)

Improved susceptibility‐weighted imaging for high contrast and resolution thalamic nuclei mapping at 7T

Automated detection of white matter and cortical lesions in early stages of multiple sclerosis

Automated Detection and Segmentation of Multiple Sclerosis Lesions Using Ultra-High-Field MP2RAGE

Domain Generalization in Fetal Brain MRI Segmentation with Multi-Reconstruction Augmentation

Longitudinal analysis of white matter and cortical lesions in multiple sclerosis

Comparison of MRI-based automated segmentation methods and functional neurosurgery targeting with direct visualization of the Ventro-intermediate thalamic nucleus at 7T

Partial‐volume modeling reveals reduced gray matter in specific thalamic nuclei early in the time course of psychosis and chronic schizophrenia

Multiple sclerosis cortical lesion detection with deep learning at ultra‐high‐field MRI

Assessment of fetal corpus callosum biometry by 3D super-resolution reconstructed T2-weighted magnetic resonance imaging

Multi-channel MRI segmentation of eye structures and tumors using patient-specific features

Cortical lesions, central vein sign, and paramagnetic rim lesions in multiple sclerosis: Emerging machine learning techniques and future avenues

RimNet: A deep 3D multimodal MRI architecture for paramagnetic rim lesion assessment in multiple sclerosis

How far MS lesion detection and segmentation are integrated into the clinical workflow? A systematic review

BMAT: An open-source BIDS managing and analysis tool

A comparative assessment of myelin-sensitive measures in multiple sclerosis patients and healthy subjects

BigBrain-MR: a new digital phantom with anatomically-realistic magnetic resonance properties at 100-µm resolution for magnetic resonance methods development

GAMER MRI: Gated-attention mechanism ranking of multi-contrast MRI in brain pathology

Myelin and axon pathology in multiple sclerosis assessed by myelin water and multi-shell diffusion imaging

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