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Relationship of DNA methylation and gene expression in idiopathic pulmonary fibrosis

American journal of respiratory and critical care medicine, 2014-12, Vol.190 (11), p.1263-1272

2014

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Outcomes of COVID‐19 in hospitalized solid organ transplant recipients compared to a matched cohort of non‐transplant patients at a national healthcare system in the United States

Clinical transplantation, 2021-04, Vol.35 (4), p.e14216-n/a

2021

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Alterations in diversity of the oral microbiome in pediatric inflammatory bowel disease

Inflammatory bowel diseases, 2012-05, Vol.18 (5), p.935-942

2012

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CRX is a diagnostic marker of retinal and pineal lineage tumors

PloS one, 2009-11, Vol.4 (11), p.e7932-e7932

2009

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Differentiating progressive from nonprogressive T1 bladder cancer by gene expression profiling: Applying RNA-sequencing analysis on archived specimens

Urologic oncology, 2014-04, Vol.32 (3), p.327-336

2014

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Live attenuated Rev-independent Nef¯SIV enhances acquisition of heterologous SIVsmE660 in acutely vaccinated rhesus macaques

PloS one, 2013, Vol.8 (9), p.e75556-e75556

2013

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A microRNA activity map of human mesenchymal tumors: connections to oncogenic pathways; an integrative transcriptomic study

BMC genomics, 2012-07, Vol.13 (1), p.332-332, Article 332

2012

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Addressing informatics challenges in Translational Research with workflow technology

Drug discovery today, 2008-09, Vol.13 (17), p.771-777

2008

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A function for cyclin D1 in DNA repair uncovered by protein interactome analyses in human cancers

Nature (London), 2011-06, Vol.474 (7350), p.230-234

2011

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Convalescent plasma associates with reduced mortality and improved clinical trajectory in patients hospitalized with COVID-19

The Journal of clinical investigation, 2021-10, Vol.131 (20), p.1-13

2021

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Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins

Nature (London), 2012-07, Vol.487 (7408), p.491-495

2012

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COLD-PCR Enrichment of Rare Cancer Mutations prior to Targeted Amplicon Resequencing

Clinical chemistry (Baltimore, Md.), 2012-03, Vol.58 (3), p.580-589

2012

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Clinical and genomic analysis of non-small cell lung cancer (NSCLC) patients with MET exon14 skipping (METex14) mutations and responses to anti-MET therapy

Journal of clinical oncology, 2020-05, Vol.38 (15_suppl), p.9613-9613

2020

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GeneSigDB: a manually curated database and resource for analysis of gene expression signatures

Nucleic acids research, 2012-01, Vol.40 (Database issue), p.D1060-D1066

2012

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Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks

Nucleic acids research, 2012-01, Vol.40 (Database issue), p.D866-D875

2012

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Mutational analysis of >14,000 solid tumor NGS tests from community oncology practices: The Sarah Cannon molecular landscape

Journal of clinical oncology, 2019-05, Vol.37 (15_suppl), p.e18065-e18065

2019

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Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia

Clinical cancer research, 2012-07, Vol.18 (14), p.3791-3802

2012

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Moving beyond gene expression: identification of lung-disease-associated novel transcripts and alternative splicing by RNA sequencing

BMC proceedings, 2012-10, Vol.6 (Suppl 6), p.P4-P4, Article P4

2012

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Ovarian reserve status in young women is associated with altered gene expression in membrana granulosa cells

Molecular human reproduction, 2012-07, Vol.18 (7-8), p.362-371

2012

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GeneSigDB--a curated database of gene expression signatures

Nucleic acids research, 2010-01, Vol.38 (Database issue), p.D716-D725

2010

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Assessment of microRNA differential expression and detection in multiplexed small RNA sequencing data

RNA (Cambridge), 2015-02, Vol.21 (2), p.164-171

2015

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Identifying and interpreting actionable molecular alterations from next-generation sequencing results in the community: A Sarah Cannon molecular cancer conference

Journal of clinical oncology, 2018-05, Vol.36 (15_suppl), p.6601-6601

2018

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Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: Preliminary assessment of cross-platform concordance

Genomics (San Diego, Calif.), 2013-07, Vol.102 (1), p.8-14

2013

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Brain and testicular tumors in mice with progenitor cells lacking BAX and BAK

Oncogene, 2013-08, Vol.32 (35), p.4078-4085

2013

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Relationship of DNA methylation and gene expression in idiopathic pulmonary fibrosis

Outcomes of COVID‐19 in hospitalized solid organ transplant recipients compared to a matched cohort of non‐transplant patients at a national healthcare system in the United States

Alterations in diversity of the oral microbiome in pediatric inflammatory bowel disease

CRX is a diagnostic marker of retinal and pineal lineage tumors

Differentiating progressive from nonprogressive T1 bladder cancer by gene expression profiling: Applying RNA-sequencing analysis on archived specimens

Live attenuated Rev-independent Nef¯SIV enhances acquisition of heterologous SIVsmE660 in acutely vaccinated rhesus macaques

A microRNA activity map of human mesenchymal tumors: connections to oncogenic pathways; an integrative transcriptomic study

Addressing informatics challenges in Translational Research with workflow technology

A function for cyclin D1 in DNA repair uncovered by protein interactome analyses in human cancers

Convalescent plasma associates with reduced mortality and improved clinical trajectory in patients hospitalized with COVID-19

Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins

COLD-PCR Enrichment of Rare Cancer Mutations prior to Targeted Amplicon Resequencing

Clinical and genomic analysis of non-small cell lung cancer (NSCLC) patients with MET exon14 skipping (METex14) mutations and responses to anti-MET therapy

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures

Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks

Mutational analysis of >14,000 solid tumor NGS tests from community oncology practices: The Sarah Cannon molecular landscape

Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia

Moving beyond gene expression: identification of lung-disease-associated novel transcripts and alternative splicing by RNA sequencing

Ovarian reserve status in young women is associated with altered gene expression in membrana granulosa cells

Exome sequencing reveals recurrent germ line variants in patients with familial Waldenström macroglobulinemia

GeneSigDB--a curated database of gene expression signatures

Assessment of microRNA differential expression and detection in multiplexed small RNA sequencing data

Identifying and interpreting actionable molecular alterations from next-generation sequencing results in the community: A Sarah Cannon molecular cancer conference

Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: Preliminary assessment of cross-platform concordance

Brain and testicular tumors in mice with progenitor cells lacking BAX and BAK

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