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Membrane Protein Simulations Using AMBER Force Field and Berger Lipid Parameters

Journal of chemical theory and computation, 2012-03, Vol.8 (3), p.948-958

2012

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Inter-residue interactions in alpha-helical transmembrane proteins

Bioinformatics, 2019-08, Vol.35 (15), p.2578-2584

2019

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Effect of Ions on a Dipalmitoyl Phosphatidylcholine Bilayer. A Molecular Dynamics Simulation Study

The journal of physical chemistry. B, 2008-02, Vol.112 (5), p.1397-1408

2008

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Structures for G-Protein-Coupled Receptor Tetramers in Complex with G Proteins

Trends in biochemical sciences (Amsterdam. Regular ed.), 2015-10, Vol.40 (10), p.548-551

2015

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Dual Role of NMDAR Containing NR2A and NR2B Subunits in Alzheimer's Disease

International journal of molecular sciences, 2024-05, Vol.25 (9), p.4757

2024

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Molecular Switches of Allosteric Modulation of the Metabotropic Glutamate 2 Receptor

Structure (London), 2017-07, Vol.25 (7), p.1153-1162.e4

2017

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Analysis of the interactions of sulfur‐containing amino acids in membrane proteins

Protein science, 2016-08, Vol.25 (8), p.1517-1524

2016

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Design of a True Bivalent Ligand with Picomolar Binding Affinity for a G Protein-Coupled Receptor Homodimer

Journal of medicinal chemistry, 2018-10, Vol.61 (20), p.9335-9346

2018

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The size matters? A computational tool to design bivalent ligands

Bioinformatics, 2018-11, Vol.34 (22), p.3857-3863

2018

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Ligand Binding Mechanisms in Human Cone Visual Pigments

Trends in biochemical sciences (Amsterdam. Regular ed.), 2019-07, Vol.44 (7), p.629-639

2019

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Impact of Helix Irregularities on Sequence Alignment and Homology Modeling of G Protein-Coupled Receptors

Chembiochem : a European journal of chemical biology, 2012-07, Vol.13 (10), p.1393-1399

2012

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Effect of Force Field Parameters on Sodium and Potassium Ion Binding to Dipalmitoyl Phosphatidylcholine Bilayers

Journal of chemical theory and computation, 2009-08, Vol.5 (8), p.2125-2134

2009

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Ligand-Triggered Structural Changes in the M 2 Muscarinic Acetylcholine Receptor

Journal of chemical information and modeling, 2018-05, Vol.58 (5), p.1074-1082

2018

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Beyond spectral tuning: human cone visual pigments adopt different transient conformations for chromophore regeneration

Cellular and molecular life sciences : CMLS, 2016-03, Vol.73 (6), p.1253-1263

2016

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DIMERBOW: exploring possible GPCR dimer interfaces

Bioinformatics, 2020-05, Vol.36 (10), p.3271-3272

2020

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Ligand-Triggered Structural Changes in the M2 Muscarinic Acetylcholine Receptor

Journal of chemical information and modeling, 2018-05, Vol.58 (5), p.1074-1082

2018

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The role of Cysteine 6.47 in class A GPCRs

BMC structural biology, 2013-03, Vol.13 (1), p.3-3, Article 3

2013

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Ligand Binding Determinants for Angiotensin II Type 1 Receptor from Computer Simulations

Journal of chemical information and modeling, 2013-11, Vol.53 (11), p.2874-2883

2013

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GPCR-SAS: A web application for statistical analyses on G protein-coupled receptors sequences

PloS one, 2018-07, Vol.13 (7), p.e0199843

2018

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Gut hormone GPCRs: structure, function, drug discovery

Current opinion in pharmacology, 2016-12, Vol.31, p.63-67

2016

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Molecular Dynamics Simulations of Rhodopsin in Different One-Component Lipid Bilayers

The journal of physical chemistry. B, 2007-06, Vol.111 (25), p.7052-7063

2007

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Molecular Mechanisms of Disease for Mutations at Gly-90 in Rhodopsin

The Journal of biological chemistry, 2011-11, Vol.286 (46), p.39993-40001

2011

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Functional elements of the gastric inhibitory polypeptide receptor: Comparison between secretin- and rhodopsin-like G protein-coupled receptors

Biochemical pharmacology, 2015-08, Vol.96 (3), p.237-246

2015

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Structure and function of adenosine receptor heteromers

Cellular and molecular life sciences : CMLS, 2021-04, Vol.78 (8), p.3957-3968

2021

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Experimental and computational analysis of biased agonism on full-length and a C-terminally truncated adenosine A2A receptor

Computational and structural biotechnology journal, 2020-01, Vol.18, p.2723-2732

2020

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Membrane Protein Simulations Using AMBER Force Field and Berger Lipid Parameters

Inter-residue interactions in alpha-helical transmembrane proteins

Effect of Ions on a Dipalmitoyl Phosphatidylcholine Bilayer. A Molecular Dynamics Simulation Study

Structures for G-Protein-Coupled Receptor Tetramers in Complex with G Proteins

Dual Role of NMDAR Containing NR2A and NR2B Subunits in Alzheimer's Disease

Molecular Switches of Allosteric Modulation of the Metabotropic Glutamate 2 Receptor

Analysis of the interactions of sulfur‐containing amino acids in membrane proteins

Design of a True Bivalent Ligand with Picomolar Binding Affinity for a G Protein-Coupled Receptor Homodimer

The size matters? A computational tool to design bivalent ligands

Ligand Binding Mechanisms in Human Cone Visual Pigments

Impact of Helix Irregularities on Sequence Alignment and Homology Modeling of G Protein-Coupled Receptors

Effect of Force Field Parameters on Sodium and Potassium Ion Binding to Dipalmitoyl Phosphatidylcholine Bilayers

Ligand-Triggered Structural Changes in the M 2 Muscarinic Acetylcholine Receptor

Beyond spectral tuning: human cone visual pigments adopt different transient conformations for chromophore regeneration

DIMERBOW: exploring possible GPCR dimer interfaces

Ligand-Triggered Structural Changes in the M2 Muscarinic Acetylcholine Receptor

The role of Cysteine 6.47 in class A GPCRs

Ligand Binding Determinants for Angiotensin II Type 1 Receptor from Computer Simulations

GPCR-SAS: A web application for statistical analyses on G protein-coupled receptors sequences

Gut hormone GPCRs: structure, function, drug discovery

Molecular Dynamics Simulations of Rhodopsin in Different One-Component Lipid Bilayers

Molecular Mechanisms of Disease for Mutations at Gly-90 in Rhodopsin

Functional elements of the gastric inhibitory polypeptide receptor: Comparison between secretin- and rhodopsin-like G protein-coupled receptors

Structure and function of adenosine receptor heteromers

Experimental and computational analysis of biased agonism on full-length and a C-terminally truncated adenosine A2A receptor

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