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Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing

Nature communications, 2016-06, Vol.7 (1), p.11708-11708, Article 11708

2016

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SMRT-Cappable-seq reveals complex operon variants in bacteria

Nature communications, 2018-09, Vol.9 (1), p.3676-11, Article 3676

2018

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The Epigenomic Landscape of Prokaryotes

PLoS genetics, 2016-02, Vol.12 (2), p.e1005854-e1005854

2016

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Direct detection of DNA methylation during single-molecule, real-time sequencing

Nature methods, 2010-06, Vol.7 (6), p.461

2010

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Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

Nucleic acids research, 2012-02, Vol.40 (4), p.e29

2012

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Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine

Nature methods, 2012-01, Vol.9 (1), p.75

2012

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Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing

Nucleic acids research, 2015-10, Vol.43 (18), p.e116

2015

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Comprehensive methylome characterization of Mycoplasma genitalium and Mycoplasma pneumoniae at single-base resolution

PLoS genetics, 2013-01, Vol.9 (1), p.e1003191-e1003191

2013

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Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae

Science translational medicine, 2014-09, Vol.6 (254), p.254ra126

2014

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A random six-phase switch regulates pneumococcal virulence via global epigenetic changes

Nature communications, 2014-09, Vol.5 (1), p.5055-5055, Article 5055

2014

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Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences

Nature communications, 2014-06, Vol.5 (1), p.3951-3951, Article 3951

2014

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Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array

BMC genomics, 2006-12, Vol.7 (1), p.325-325, Article 325

2006

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Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB

Nature structural & molecular biology, 2010-09, Vol.17 (9), p.1114

2010

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Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy

Nature structural & molecular biology, 2010-02, Vol.17 (2), p.187

2010

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Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation

BMC biology, 2013-01, Vol.11 (1), p.4-4, Article 4

2013

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Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle

Proceedings of the National Academy of Sciences - PNAS, 2013-11, Vol.110 (48), p.E4658-E4667

2013

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Analysis of RNA base modification and structural rearrangement by single-molecule real-time detection of reverse transcription

Journal of nanobiotechnology, 2013-04, Vol.11 (1), p.8-8, Article 8

2013

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Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation

Proceedings of the National Academy of Sciences - PNAS, 2010-06, Vol.107 (23), p.10514-10519

2010

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CRISPR/Cas9-targeted enrichment and long-read sequencing of the Fuchs endothelial corneal dystrophy–associated TCF4 triplet repeat

Genetics in medicine, 2019-09, Vol.21 (9), p.2092-2102

2019

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Sex chromosome evolution in parasitic nematodes of humans

Nature communications, 2020-04, Vol.11 (1), p.1964-1964, Article 1964

2020

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Whole-genome assembly of Klebsiella pneumoniae coproducing NDM-1 and OXA-232 carbapenemases using single-molecule, real-time sequencing

Antimicrobial agents and chemotherapy, 2014-10, Vol.58 (10), p.5947-5953

2014

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Structural and functional diversity among Type III restriction-modification systems that confer host DNA protection via methylation of the N4 atom of cytosine

PloS one, 2021-07, Vol.16 (7), p.e0253267-e0253267

2021

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Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9

mBio, 2015-06, Vol.6 (3), p.e00648-e00648

2015

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Identification of Genetic Variants Contributing to Cisplatin-Induced Cytotoxicity by Use of a Genomewide Approach

American journal of human genetics, 2007-09, Vol.81 (3), p.427-437

2007

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Discovery of tissue-specific exons using comprehensive human exon microarrays

Genome biology, 2007-01, Vol.8 (4), p.R64-R64

2007

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Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing

SMRT-Cappable-seq reveals complex operon variants in bacteria

The Epigenomic Landscape of Prokaryotes

Direct detection of DNA methylation during single-molecule, real-time sequencing

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine

Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing

Comprehensive methylome characterization of Mycoplasma genitalium and Mycoplasma pneumoniae at single-base resolution

Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae

A random six-phase switch regulates pneumococcal virulence via global epigenetic changes

Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array

Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB

Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy

Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation

Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle

Analysis of RNA base modification and structural rearrangement by single-molecule real-time detection of reverse transcription

Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation

CRISPR/Cas9-targeted enrichment and long-read sequencing of the Fuchs endothelial corneal dystrophy–associated TCF4 triplet repeat

Sex chromosome evolution in parasitic nematodes of humans

Whole-genome assembly of Klebsiella pneumoniae coproducing NDM-1 and OXA-232 carbapenemases using single-molecule, real-time sequencing

Structural and functional diversity among Type III restriction-modification systems that confer host DNA protection via methylation of the N4 atom of cytosine

Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9

Identification of Genetic Variants Contributing to Cisplatin-Induced Cytotoxicity by Use of a Genomewide Approach

Discovery of tissue-specific exons using comprehensive human exon microarrays

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