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Dynamical modeling and analysis of large cellular regulatory networks

Chaos (Woodbury, N.Y.), 2013-06, Vol.23 (2), p.025114-025114

2013

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Petri net modelling of biological networks

Briefings in bioinformatics, 2007-07, Vol.8 (4), p.210-219

Chaouiya, Claudine

2007

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Logical modelling of regulatory networks with GINsim 2.3

BioSystems, 2009-08, Vol.97 (2), p.134-139

2009

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GINsim: A software suite for the qualitative modelling, simulation and analysis of regulatory networks

BioSystems, 2006-05, Vol.84 (2), p.91-100

2006

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Petri net representation of multi-valued logical regulatory graphs

Natural computing, 2011-06, Vol.10 (2), p.727-750

2011

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Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli

Bioinformatics, 2005-09, Vol.21 (suppl-2), p.ii190-ii196

2005

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Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle

Bioinformatics, 2006-07, Vol.22 (14), p.e124-e131

2006

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In Silico Logical Modelling to Uncover Cooperative Interactions in Cancer

International journal of molecular sciences, 2021-05, Vol.22 (9), p.4897

2021

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656 Mathematical Modeling of Bladder Tumorigenesis

European journal of cancer (1990), 2012-07, Vol.48, p.S155-S156

2012

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A description of dynamical graphs associated to elementary regulatory circuits

Bioinformatics, 2003-09, Vol.19 (suppl-2), p.ii172-ii178

2003

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Segmenting the fly embryo: logical analysis of the role of the segment polarity cross-regulatory module

The International journal of developmental biology, 2008, Vol.52 (8), p.1059-1075

2008

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Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc

Bioinformatics, 2008-08, Vol.24 (16), p.i234-i240

2008

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Dynamical Analysis of the Regulatory Network Defining the Dorsal-Ventral Boundary of the Drosophila Wing Imaginal Disc

Genetics (Austin), 2006-11, Vol.174 (3), p.1625-1634

2006

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Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets

Applications and Theory of Petri Nets 2004, 2004, p.137-156

2004

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Dynamical modeling of biological regulatory networks

BioSystems, 2005, Vol.84, p.77-80

2005

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GINsim: A software suite for the qualitative modelling, simulation and analysis of regulatory networks

BioSystems, 2006-05, Vol.84 (2), p.91-100

2006

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A description of dynamical graphs associated to elementary regulatory circuits

Bioinformatics (Oxford, England), 2003, Vol.19 (supl.2), p.ii172-ii178

2003

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Qualitative modelling of biological regulatory networks combining a logical multi-valued formalism and Petri nets

2008 9th International Workshop on Discrete Event Systems, 2008, p.263-268

Chaouiya, C.

2008

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Model Checking Logical Regulatory Networks

IFAC Proceedings Volumes, 2014, Vol.47 (2), p.170-175

2014

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The extended kanban control system for production coordination of assembly manufacturing systems

IIE transactions, 2000-10, Vol.32 (10), p.999-1012

2000

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Reduction of logical models of regulatory networks yields insight into dynamical properties

2010 IEEE International Conference on Control Applications, 2010, p.524-529

2010

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Bringing dicynodonts back to life: paleobiology and anatomy of a new emydopoid genus from the Upper Permian of Mozambique

PloS one, 2013-12, Vol.8 (12), p.e80974-e80974

2013

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The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2

Journal of integrative bioinformatics, 2019-06, Vol.16 (2)

2019

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Assessing regulatory features of the current transcriptional network of Saccharomyces cerevisiae

Scientific reports, 2020-10, Vol.10 (1), p.17744-17744, Article 17744

2020

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The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST)

Bioinformatics, 2021-04, Vol.36 (24), p.5712-5718

2021

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Dynamical modeling and analysis of large cellular regulatory networks

Petri net modelling of biological networks

Logical modelling of regulatory networks with GINsim 2.3

GINsim: A software suite for the qualitative modelling, simulation and analysis of regulatory networks

Petri net representation of multi-valued logical regulatory graphs

Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli

Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle

In Silico Logical Modelling to Uncover Cooperative Interactions in Cancer

656 Mathematical Modeling of Bladder Tumorigenesis

A description of dynamical graphs associated to elementary regulatory circuits

Segmenting the fly embryo: logical analysis of the role of the segment polarity cross-regulatory module

Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc

Dynamical Analysis of the Regulatory Network Defining the Dorsal-Ventral Boundary of the Drosophila Wing Imaginal Disc

Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets

Dynamical modeling of biological regulatory networks

GINsim: A software suite for the qualitative modelling, simulation and analysis of regulatory networks

A description of dynamical graphs associated to elementary regulatory circuits

Qualitative modelling of biological regulatory networks combining a logical multi-valued formalism and Petri nets

Model Checking Logical Regulatory Networks

The extended kanban control system for production coordination of assembly manufacturing systems

Reduction of logical models of regulatory networks yields insight into dynamical properties

Bringing dicynodonts back to life: paleobiology and anatomy of a new emydopoid genus from the Upper Permian of Mozambique

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2

Assessing regulatory features of the current transcriptional network of Saccharomyces cerevisiae

The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST)

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