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An experimental study of the effects of SNPs in the TATA boxes of the GRIN1, ASCL3 and NOS1 genes on interactions with the TATA-binding protein

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2022-05, Vol.26 (3), p.227-233

2022

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Differential expression of 10 genes in the hypothalamus of two generations of rats selected for a reaction to humans

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2021-03, Vol.25 (2), p.208-215

2021

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RatDEGdb: a knowledge base of differentially expressed genes in the rat as a model object in biomedical research

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2023-12, Vol.27 (7), p.794-806

2023

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A bioinformatic search for correspondence between differentially expressed genes of domestic versus wild animals and orthologous human genes altering reproductive potential

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2022-02, Vol.26 (1), p.96-108

2022

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Candidate SNP-markers altering TBP binding affinity for promoters of the Y-linked genes CDY2A, SHOX, and ZFY are lowering many indexes of reproductive potential in men

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2020-12, Vol.24 (7), p.785-793

2020

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Promoters of genes encoding β-amylase, albumin and globulin in food plants have weaker affinity for TATA-binding protein as compared to non-food plants: in silico analysis

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2022-12, Vol.26 (8), p.798-805

2022

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Russian Science Foundation grant No. 20-14-00140 supported this study. The authors are thankful to the multi-access Center “Bioinformatics” for the use of computational resources as supported by Russian government project FWNR-2022-0020 and the Russian Federal Science and Technology Program for the Development of Genetic Technologies

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2023-01, Vol.26 (8), p.798-805

2023

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Сandidate SNP-markers of rheumatoid arthritis that can significantly alter the affinity of the TATA-binding protein for human gene promoters

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2020-01, Vol.23 (8), p.1047-1058

2020

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Differential alternative splicing in brain regions of rats selected for aggressive behavior

Molecular biology (New York), 2017-09, Vol.51 (5), p.759-768

2017

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Candidate SNP markers of social dominance, which may affect the affinity of the TATA-binding protein for human gene promoters

Russian journal of genetics. Applied research, 2017-07, Vol.7 (5), p.523-537

2017

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Flanking monomer repeats determine decreased context complexity of single nucleotide polymorphism sites in the human genome

Russian journal of genetics. Applied research, 2016-12, Vol.6 (8), p.809-815

2016

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Role of apoptosis genes in aggression revealed using combined analysis of ANDSystem gene networks, expression and genomic data in grey rats with aggressive behavior

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2018-01, Vol.21 (8), p.911-919

2018

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Candidate SNP markers of social dominance, which may affect the affinity of the TATAbinding protein for human gene promoters

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2017-02, Vol.20 (6), p.787-796

2017

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Computer analysis of colocalization of the TFs’ binding sites in the genome according to the ChIP-seq data

Russian journal of genetics. Applied research, 2017-07, Vol.7 (5), p.513-522

2017

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Computer analysis of co-localization of transcription factor binding sites in genome by ChIP-seq data

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2017-02, Vol.20 (6), p.770-778

2017

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Flanking monomer repeats define lower context complexity of sites containing single nucleotide polymorphisms in the human genome

Vavilov Journal of Genetics and Breeding, 2016-01, Vol.19 (6), p.668-674

2016

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Computational problems of analysis of short next generation sequencing reads

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2017-02, Vol.20 (6), p.746-755

2017

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Candidate SNP Markers of Atherosclerosis That May Significantly Change the Affinity of the TATA-Binding Protein for the Human Gene Promoters

Russian journal of genetics, 2019-09, Vol.55 (9), p.1137-1151

2019

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Candidate SNP-markers altering TBP binding affinity for promoters of the Y-linked genes CDY2A, SHOX, and ZFY are lowering many indexes of reproductive potential in men

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2020-11, Vol.24 (7), p.785-793

2020

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Кандидатные SNP-маркеры, изменяющие сродство ТВР к промоторам Y-связанных генов CDY2A, SHOX, ZFY, снижают ряд показателей репродуктивного потенциала мужчин

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2020-11, Vol.24 (7), p.785-793

2020

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The Computer Database for the Analysis of Differentially Expressing Genes, Related to Aggressive Behavior on Models of Laboratory Animals

Vestnik NSU. Series: Information Technologies, 2018, Vol.16 (3), p.7-21

2018

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The current state of forest ecosystems in the Khosta Yew-Boxwood Grove

Environmental monitoring and assessment, 2023-01, Vol.195 (1), p.183-183, Article 183

2023

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Candidate SNP markers of reproductive potential are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

BMC genomics, 2018-02, Vol.19 (Suppl 3), p.0-0, Article 0

2018

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Distribution factors of the epiphytic lichen Lobaria pulmonaria (L.) Hoffm. at local and regional spatial scales in the Caucasus: combining species distribution modelling and ecological niche theory

IForest (Viterbo), 2024-04, Vol.17 (2), p.120-131

2024

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Genomic landscape of CpG rich elements in human

BMC evolutionary biology, 2017-02, Vol.17 (Suppl 1), p.19, Article 19

2017

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An experimental study of the effects of SNPs in the TATA boxes of the GRIN1, ASCL3 and NOS1 genes on interactions with the TATA-binding protein

Differential expression of 10 genes in the hypothalamus of two generations of rats selected for a reaction to humans

RatDEGdb: a knowledge base of differentially expressed genes in the rat as a model object in biomedical research

A bioinformatic search for correspondence between differentially expressed genes of domestic versus wild animals and orthologous human genes altering reproductive potential

Candidate SNP-markers altering TBP binding affinity for promoters of the Y-linked genes CDY2A, SHOX, and ZFY are lowering many indexes of reproductive potential in men

Promoters of genes encoding β-amylase, albumin and globulin in food plants have weaker affinity for TATA-binding protein as compared to non-food plants: in silico analysis

Сandidate SNP-markers of rheumatoid arthritis that can significantly alter the affinity of the TATA-binding protein for human gene promoters

Differential alternative splicing in brain regions of rats selected for aggressive behavior

Candidate SNP markers of social dominance, which may affect the affinity of the TATA-binding protein for human gene promoters

Flanking monomer repeats determine decreased context complexity of single nucleotide polymorphism sites in the human genome

Role of apoptosis genes in aggression revealed using combined analysis of ANDSystem gene networks, expression and genomic data in grey rats with aggressive behavior

Candidate SNP markers of social dominance, which may affect the affinity of the TATAbinding protein for human gene promoters

Computer analysis of colocalization of the TFs’ binding sites in the genome according to the ChIP-seq data

Computer analysis of co-localization of transcription factor binding sites in genome by ChIP-seq data

Flanking monomer repeats define lower context complexity of sites containing single nucleotide polymorphisms in the human genome

Computational problems of analysis of short next generation sequencing reads

Candidate SNP Markers of Atherosclerosis That May Significantly Change the Affinity of the TATA-Binding Protein for the Human Gene Promoters

Candidate SNP-markers altering TBP binding affinity for promoters of the Y-linked genes CDY2A, SHOX, and ZFY are lowering many indexes of reproductive potential in men

Кандидатные SNP-маркеры, изменяющие сродство ТВР к промоторам Y-связанных генов CDY2A, SHOX, ZFY, снижают ряд показателей репродуктивного потенциала мужчин

The Computer Database for the Analysis of Differentially Expressing Genes, Related to Aggressive Behavior on Models of Laboratory Animals

The current state of forest ecosystems in the Khosta Yew-Boxwood Grove

Candidate SNP markers of reproductive potential are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters

Distribution factors of the epiphytic lichen Lobaria pulmonaria (L.) Hoffm. at local and regional spatial scales in the Caucasus: combining species distribution modelling and ecological niche theory

Genomic landscape of CpG rich elements in human

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