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Functional roles of alternative splicing factors in human disease

Wiley interdisciplinary reviews. RNA, 2015-05, Vol.6 (3), p.311-326

2015

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Complex changes in alternative pre-mRNA splicing play a central role in the epithelial-to-mesenchymal transition (EMT)

Seminars in cancer biology, 2012-10, Vol.22 (5), p.417-427

2012

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ESRP1 and ESRP2 Are Epithelial Cell-Type-Specific Regulators of FGFR2 Splicing

Molecular cell, 2009-03, Vol.33 (5), p.591-601

2009

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MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data

Nucleic acids research, 2012-04, Vol.40 (8), p.e61-e61

2012

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Determination of a Comprehensive Alternative Splicing Regulatory Network and Combinatorial Regulation by Key Factors during the Epithelial-to-Mesenchymal Transition

Molecular and cellular biology, 2016-06, Vol.36 (11), p.1704-1719

2016

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Alternative splicing regulates distinct subcellular localization of Epithelial splicing regulatory protein 1 (Esrp1) isoforms

Scientific reports, 2017-06, Vol.7 (1), p.3848-10, Article 3848

2017

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Multiphasic and Dynamic Changes in Alternative Splicing during Induction of Pluripotency Are Coordinated by Numerous RNA-Binding Proteins

Cell reports (Cambridge), 2016-04, Vol.15 (2), p.247-255

2016

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The germ cell-specific RNA binding protein RBM46 is essential for spermatogonial differentiation in mice

PLoS genetics, 2022-09, Vol.18 (9), p.e1010416-e1010416

2022

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Exo70 Isoform Switching upon Epithelial-Mesenchymal Transition Mediates Cancer Cell Invasion

Developmental cell, 2013-12, Vol.27 (5), p.560-573

2013

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The splicing regulators Esrp1 and Esrp2 direct an epithelial splicing program essential for mammalian development

eLife, 2015-09, Vol.4

2015

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The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events

RNA biology, 2009-11, Vol.6 (5), p.546-562

2009

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Splicing program of human MENA produces a previously undescribed isoform associated with invasive, mesenchymal-like breast tumors

Proceedings of the National Academy of Sciences - PNAS, 2012-11, Vol.109 (47), p.19280-19285

2012

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Networking in an Alternative Splicing World

Molecular cell, 2014-06, Vol.54 (6), p.903-904

Carstens, Russ P.

2014

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The RNA binding protein RBM38 (RNPC1) regulates splicing during late erythroid differentiation

PloS one, 2013-10, Vol.8 (10), p.e78031-e78031

2013

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Heterogeneous Ribonucleoprotein M Is a Splicing Regulatory Protein That Can Enhance or Silence Splicing of Alternatively Spliced Exons

The Journal of biological chemistry, 2007-12, Vol.282 (50), p.36265-36274

2007

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The global Protein-RNA interaction map of ESRP1 defines a post-transcriptional program that is essential for epithelial cell function

iScience, 2022-10, Vol.25 (10), p.105205-105205, Article 105205

2022

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Functional analysis of ESRP1/2 gene variants and CTNND1 isoforms in orofacial cleft pathogenesis

Communications biology, 2024-08, Vol.7 (1), p.1040-14

2024

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MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data

Nucleic acids research, 2012-04, Vol.40 (8), p.e61

2012

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MADS+: discovery of differential splicing events from Affymetrix exon junction array data

Bioinformatics, 2010-01, Vol.26 (2), p.268-269

2010

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Alternative splicing rewires Hippo signaling pathway in hepatocytes to promote liver regeneration

Nature structural & molecular biology, 2018-10, Vol.25 (10), p.928-939

2018

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Deep-learning augmented RNA-seq analysis of transcript splicing

Nature methods, 2019-04, Vol.16 (4), p.307-310

2019

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An ESRP-regulated splicing programme is abrogated during the epithelial-mesenchymal transition

The EMBO journal, 2010-10, Vol.29 (19), p.3286-3300

2010

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Identification of a putative network of actin-associated cytoskeletal proteins in glomerular podocytes defined by co-purified mRNAs

PloS one, 2009-08, Vol.4 (8), p.e6491-e6491

2009

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Cleft lip and cleft palate in Esrp1 knockout mice is associated with alterations in epithelial-mesenchymal crosstalk

Development (Cambridge), 2020-04, Vol.147 (21)

2020

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Functional roles of alternative splicing factors in human disease

Complex changes in alternative pre-mRNA splicing play a central role in the epithelial-to-mesenchymal transition (EMT)

ESRP1 and ESRP2 Are Epithelial Cell-Type-Specific Regulators of FGFR2 Splicing

MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data

Determination of a Comprehensive Alternative Splicing Regulatory Network and Combinatorial Regulation by Key Factors during the Epithelial-to-Mesenchymal Transition

Alternative splicing regulates distinct subcellular localization of Epithelial splicing regulatory protein 1 (Esrp1) isoforms

Multiphasic and Dynamic Changes in Alternative Splicing during Induction of Pluripotency Are Coordinated by Numerous RNA-Binding Proteins

The germ cell-specific RNA binding protein RBM46 is essential for spermatogonial differentiation in mice

Exo70 Isoform Switching upon Epithelial-Mesenchymal Transition Mediates Cancer Cell Invasion

The splicing regulators Esrp1 and Esrp2 direct an epithelial splicing program essential for mammalian development

The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events

Splicing program of human MENA produces a previously undescribed isoform associated with invasive, mesenchymal-like breast tumors

Networking in an Alternative Splicing World

The RNA binding protein RBM38 (RNPC1) regulates splicing during late erythroid differentiation

Heterogeneous Ribonucleoprotein M Is a Splicing Regulatory Protein That Can Enhance or Silence Splicing of Alternatively Spliced Exons

The global Protein-RNA interaction map of ESRP1 defines a post-transcriptional program that is essential for epithelial cell function

Functional analysis of ESRP1/2 gene variants and CTNND1 isoforms in orofacial cleft pathogenesis

MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data

MADS+: discovery of differential splicing events from Affymetrix exon junction array data

Alternative splicing rewires Hippo signaling pathway in hepatocytes to promote liver regeneration

Deep-learning augmented RNA-seq analysis of transcript splicing

A compendium of RNA-binding motifs for decoding gene regulation

An ESRP-regulated splicing programme is abrogated during the epithelial-mesenchymal transition

Identification of a putative network of actin-associated cytoskeletal proteins in glomerular podocytes defined by co-purified mRNAs

Cleft lip and cleft palate in Esrp1 knockout mice is associated with alterations in epithelial-mesenchymal crosstalk

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