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The Immune System Computes the State of the Body: Crowd Wisdom, Machine Learning, and Immune Cell Reference Repertoires Help Manage Inflammation

Frontiers in immunology, 2019-01, Vol.10, p.10-10

2019

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Bacillus Calmette-Guérin (BCG) therapy lowers the incidence of Alzheimer's disease in bladder cancer patients

PloS one, 2019-11, Vol.14 (11), p.e0224433-e0224433

2019

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T cell receptor repertoires of mice and humans are clustered in similarity networks around conserved public CDR3 sequences

eLife, 2017-07, Vol.6

2017

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Newborn humans manifest autoantibodies to defined self molecules detected by antigen microarray informatics

The Journal of clinical investigation, 2007-03, Vol.117 (3), p.712-718

2007

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The evolution of universal adaptations of life is driven by universal properties of matter: energy, entropy, and interaction [version 3; peer review: 3 approved]

F1000 research, 2020, Vol.9, p.626-626

2020

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Heat shock protein 60 enhances CD4+ CD25+ regulatory T cell function via innate TLR2 signaling

The Journal of clinical investigation, 2018-06, Vol.116 (7), p.2022-2032

2018

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Heat Shock Proteins as Endogenous Adjuvants in Sterile and Septic Inflammation

The Journal of immunology (1950), 2005-09, Vol.175 (5), p.2777-2782

2005

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Signaling via TLR2 and TLR4 Directly Down-Regulates T Cell Effector Functions: The Regulatory Face of Danger Signals

Frontiers in immunology, 2013-01, Vol.4, p.211-211

2013

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Beta-lactam antibiotics modulate T-cell functions and gene expression via covalent binding to cellular albumin

Proceedings of the National Academy of Sciences - PNAS, 2013-02, Vol.110 (8), p.2981-2986

2013

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Antigen microarrays identify unique serum autoantibody signatures in clinical and pathologic subtypes of multiple sclerosis

Proceedings of the National Academy of Sciences - PNAS, 2008-12, Vol.105 (48), p.18889-18894

2008

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Explaining a complex living system: dynamics, multi-scaling and emergence

Journal of the Royal Society interface, 2007-04, Vol.4 (13), p.175

2007

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Evolution is driven by natural autoencoding: reframing species, interaction codes, cooperation and sexual reproduction

Proceedings of the Royal Society. B, Biological sciences, 2023-03, Vol.290 (1994), p.20222409-20222409

2023

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DNA vaccine encoding heat shock protein 90 protects from murine lupus

Arthritis research & therapy, 2020-06, Vol.22 (1), p.152-152, Article 152

2020

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The evolution of universal adaptations of life is driven by universal properties of matter: energy, entropy, and interaction [version 2; peer review: 3 approved]

F1000 research, 2020, Vol.9, p.626

2020

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Inhibition of Myeloid Differentiation Factor 88 Reduces Human and Mouse T-Cell Interleukin-17 and IFNγ Production and Ameliorates Experimental Autoimmune Encephalomyelitis Induced in Mice

Frontiers in immunology, 2017-05, Vol.8, p.615-615

2017

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Heat Shock Protein 60 Activates B Cells via the TLR4-MyD88 Pathway

The Journal of immunology (1950), 2005-09, Vol.175 (6), p.3594-3602

2005

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Autoantibody repertoires, natural biomarkers, and system controllers

Trends in immunology, 2013-12, Vol.34 (12), p.620-625

Cohen, Irun R

2013

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Four-dimensional realistic modeling of pancreatic organogenesis

Proceedings of the National Academy of Sciences - PNAS, 2008-12, Vol.105 (51), p.20374-20379

2008

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Organization of the autoantibody repertoire in healthy newborns and adults revealed by system level informatics of antigen microarray data

Proceedings of the National Academy of Sciences - PNAS, 2009-08, Vol.106 (34), p.14484-14489

2009

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Emergent dynamics of thymocyte development and lineage determination

PLoS computational biology, 2007-01, Vol.3 (1), p.e13-e13

2007

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SLE-key® rule-out serologic test for excluding the diagnosis of systemic lupus erythematosus: Developing the ImmunArray iCHIP

Journal of immunological methods, 2016-02, Vol.429, p.1-6

2016

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T cell vaccination benefits relapsing progressive multiple sclerosis patients: a randomized, double-blind clinical trial

PloS one, 2012-12, Vol.7 (12), p.e50478-e50478

2012

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The HSP60 immune system network

Trends in immunology, 2011-02, Vol.32 (2), p.89-95

2011

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T-cell receptor repertoires share a restricted set of public and abundant CDR3 sequences that are associated with self-related immunity

Genome research, 2014-10, Vol.24 (10), p.1603

2014

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Network theory analysis of antibody-antigen reactivity data: the immune trees at birth and adulthood

PloS one, 2011-03, Vol.6 (3), p.e17445-e17445

2011

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The Immune System Computes the State of the Body: Crowd Wisdom, Machine Learning, and Immune Cell Reference Repertoires Help Manage Inflammation

Bacillus Calmette-Guérin (BCG) therapy lowers the incidence of Alzheimer's disease in bladder cancer patients

T cell receptor repertoires of mice and humans are clustered in similarity networks around conserved public CDR3 sequences

Newborn humans manifest autoantibodies to defined self molecules detected by antigen microarray informatics

The evolution of universal adaptations of life is driven by universal properties of matter: energy, entropy, and interaction [version 3; peer review: 3 approved]

Heat shock protein 60 enhances CD4+ CD25+ regulatory T cell function via innate TLR2 signaling

Heat Shock Proteins as Endogenous Adjuvants in Sterile and Septic Inflammation

Signaling via TLR2 and TLR4 Directly Down-Regulates T Cell Effector Functions: The Regulatory Face of Danger Signals

Beta-lactam antibiotics modulate T-cell functions and gene expression via covalent binding to cellular albumin

Antigen microarrays identify unique serum autoantibody signatures in clinical and pathologic subtypes of multiple sclerosis

Explaining a complex living system: dynamics, multi-scaling and emergence

Evolution is driven by natural autoencoding: reframing species, interaction codes, cooperation and sexual reproduction

DNA vaccine encoding heat shock protein 90 protects from murine lupus

The evolution of universal adaptations of life is driven by universal properties of matter: energy, entropy, and interaction [version 2; peer review: 3 approved]

Inhibition of Myeloid Differentiation Factor 88 Reduces Human and Mouse T-Cell Interleukin-17 and IFNγ Production and Ameliorates Experimental Autoimmune Encephalomyelitis Induced in Mice

Heat Shock Protein 60 Activates B Cells via the TLR4-MyD88 Pathway

Autoantibody repertoires, natural biomarkers, and system controllers

Four-dimensional realistic modeling of pancreatic organogenesis

Organization of the autoantibody repertoire in healthy newborns and adults revealed by system level informatics of antigen microarray data

Emergent dynamics of thymocyte development and lineage determination

SLE-key® rule-out serologic test for excluding the diagnosis of systemic lupus erythematosus: Developing the ImmunArray iCHIP

T cell vaccination benefits relapsing progressive multiple sclerosis patients: a randomized, double-blind clinical trial

The HSP60 immune system network

T-cell receptor repertoires share a restricted set of public and abundant CDR3 sequences that are associated with self-related immunity

Network theory analysis of antibody-antigen reactivity data: the immune trees at birth and adulthood

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