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Blood gene expression signatures predict exposure levels

Proceedings of the National Academy of Sciences - PNAS, 2007-11, Vol.104 (46), p.18211-18216

2007

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The nitrone spin trap 5,5-dimethyl-1-pyrroline N-oxide dampens lipopolysaccharide-induced transcriptomic changes in macrophages

Inflammation research, 2018-06, Vol.67 (6), p.515-530

2018

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Blood transcript immune signatures distinguish a subset of people with elevated serum ALT from others given acetaminophen

Clinical pharmacology and therapeutics, 2016-04, Vol.99 (4), p.432-441

2016

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Genomic indicators in the blood predict drug-induced liver injury

The pharmacogenomics journal, 2010-08, Vol.10 (4), p.267-277

2010

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The evolution of bioinformatics in toxicology: advancing toxicogenomics

Toxicological sciences, 2011-03, Vol.120 Suppl 1 (Supplement 1), p.S225-S237

2011

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Consistency of predictive signature genes and classifiers generated using different microarray platforms

The pharmacogenomics journal, 2010-08, Vol.10 (4), p.247-257

2010

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Blood gene expression profiling of an early acetaminophen response

The pharmacogenomics journal, 2017-06, Vol.17 (3), p.230-236

2017

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Inactivation of DNA Mismatch Repair by Increased Expression of Yeast MLH1

Molecular and Cellular Biology, 2001-02, Vol.21 (3), p.940-951

2001

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A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data

The pharmacogenomics journal, 2010-08, Vol.10 (4), p.278-291

2010

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Progress in the Application of DNA Microarrays

Environmental health perspectives, 2001-09, Vol.109 (9), p.881-891

2001

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Insulin-Like Growth Factor-1 Inscribes a Gene Expression Profile for Angiogenic Factors and Cancer Progression in Breast Epithelial Cells

Neoplasia (New York, N.Y.), 2002, Vol.4 (3), p.204-217

2002

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MAPS: a microarray project system for gene expression experiment information and data validation

Bioinformatics, 2001-06, Vol.17 (6), p.564-565

2001

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Smooth Muscle α-Actin Promoter Activity Is Induced by Serum Stimulation of Fibroblast Cells

Biochemical and biophysical research communications, 1993-02, Vol.190 (3), p.1115-1121

1993

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Development of gut microbiota in infants not exposed to medical interventions

APMIS : acta pathologica, microbiologica et immunologica Scandinavica, 2011-01, Vol.119 (1), p.17-35

2011

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Gene Expression Analysis Reveals Chemical-Specific Profiles

Toxicological sciences, 2002-06, Vol.67 (2), p.219-231

2002

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Prediction of Compound Signature Using High Density Gene Expression Profiling

Toxicological sciences, 2002-06, Vol.67 (2), p.232-240

2002

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Database Development in Toxicogenomics: Issues and Efforts

Environmental health perspectives, 2004-03, Vol.112 (4), p.495-505

2004

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Methapyrilene Toxicity: Anchorage of Pathologic Observations to Gene Expression Alterations

Toxicologic pathology, 2002-07, Vol.30 (4), p.470-482

2002

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Empirical evaluation of data transformations and ranking statistics for microarray analysis

Nucleic acids research, 2004-01, Vol.32 (18), p.5471-5479

2004

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Differential Toxicogenomic Responses to 2,3,7,8-Tetrachlorodibenzo-p-dioxin in Malignant and Nonmalignant Human Airway Epithelial Cells

Toxicological sciences, 2002-10, Vol.69 (2), p.409-423

2002

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Genomic interrogation of mechanism(s) underlying cellular responses to toxicants

Toxicology (Amsterdam), 2002-12, Vol.181, p.555-563

2002

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Tamoxifen functions as a molecular agonist inducing cell cycle-associated genes in breast cancer cells

Molecular cancer research, 2003-02, Vol.1 (4), p.300-311

2003

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Genomic indicators in the blood predict drug-induced liver injury: The MicroArray Quality Control II

Nature biotechnology, 2010, Vol.28 (OCT)

2010

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Consistency of predictive signature genes and classifiers generated using different microarray platforms: The MicroArray Quality Control II

Nature biotechnology, 2010, Vol.28 (OCT)

2010

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Clustering of gene expression data and end-point measurements by simulated annealing

Journal of bioinformatics and computational biology, 2009-02, Vol.7 (1), p.193-215

Bushel, Pierre R

2009

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Blood gene expression signatures predict exposure levels

The nitrone spin trap 5,5-dimethyl-1-pyrroline N-oxide dampens lipopolysaccharide-induced transcriptomic changes in macrophages

Blood transcript immune signatures distinguish a subset of people with elevated serum ALT from others given acetaminophen

Genomic indicators in the blood predict drug-induced liver injury

The evolution of bioinformatics in toxicology: advancing toxicogenomics

Consistency of predictive signature genes and classifiers generated using different microarray platforms

Blood gene expression profiling of an early acetaminophen response

Inactivation of DNA Mismatch Repair by Increased Expression of Yeast MLH1

A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data

Progress in the Application of DNA Microarrays

Insulin-Like Growth Factor-1 Inscribes a Gene Expression Profile for Angiogenic Factors and Cancer Progression in Breast Epithelial Cells

MAPS: a microarray project system for gene expression experiment information and data validation

Smooth Muscle α-Actin Promoter Activity Is Induced by Serum Stimulation of Fibroblast Cells

Development of gut microbiota in infants not exposed to medical interventions

Gene Expression Analysis Reveals Chemical-Specific Profiles

Prediction of Compound Signature Using High Density Gene Expression Profiling

Database Development in Toxicogenomics: Issues and Efforts

Methapyrilene Toxicity: Anchorage of Pathologic Observations to Gene Expression Alterations

Empirical evaluation of data transformations and ranking statistics for microarray analysis

Differential Toxicogenomic Responses to 2,3,7,8-Tetrachlorodibenzo-p-dioxin in Malignant and Nonmalignant Human Airway Epithelial Cells

Genomic interrogation of mechanism(s) underlying cellular responses to toxicants

Tamoxifen functions as a molecular agonist inducing cell cycle-associated genes in breast cancer cells

Genomic indicators in the blood predict drug-induced liver injury: The MicroArray Quality Control II

Consistency of predictive signature genes and classifiers generated using different microarray platforms: The MicroArray Quality Control II

Clustering of gene expression data and end-point measurements by simulated annealing

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