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Identification of the viral RNA promoter stem loop A (SLA)-binding site on Zika virus polymerase NS5

Scientific reports, 2020-08, Vol.10 (1), p.13306-13306, Article 13306

2020

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Biochemical and Biophysical Characterization of the dsDNA Packaging Motor from the Lactococcus lactis Bacteriophage Asccphi28

Viruses, 2020-12, Vol.13 (1), p.15

2020

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The Escherichia coli Primosomal DnaT Protein Exists in Solution as a Monomer–Trimer Equilibrium System

Biochemistry (Easton), 2013-03, Vol.52 (11), p.1845-1857

2013

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Energetics of the Escherichia coli DnaT Protein Trimerization Reaction

Biochemistry (Easton), 2013-03, Vol.52 (11), p.1858-1873

2013

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Unzipping Mechanism of the Double-stranded DNA Unwinding by a Hexameric Helicase: Quantitative Analysis of the Rate of the dsDNA Unwinding, Processivity and Kinetic Step-size of the Escherichia coli DnaB Helicase Using Rapid Quench-flow Method

Journal of molecular biology, 2004-10, Vol.343 (1), p.83-99

2004

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Binding of Two PriA–PriB Complexes to the Primosome Assembly Site Initiates Primosome Formation

Journal of molecular biology, 2011-08, Vol.411 (1), p.123-142

2011

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Unzipping Mechanism of the Double-stranded DNA Unwinding by a Hexameric Helicase: The Effect of the 3′ Arm and the Stability of the dsDNA on the Unwinding Activity of the Escherichia coli DnaB Helicase

Journal of molecular biology, 2004-10, Vol.343 (1), p.101-114

2004

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Thermodynamic and Kinetic Methods of Analyses of Protein−Nucleic Acid Interactions. From Simpler to More Complex Systems

Chemical reviews, 2006-02, Vol.106 (2), p.556-606

Bujalowski, Wlodzimierz

2006

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Interactions between the Dengue Virus Polymerase NS5 and Stem-Loop A

Journal of virology, 2017-06, Vol.91 (11)

2017

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The Escherichia coli PriA Helicase Specifically Recognizes Gapped DNA Substrates

The Journal of biological chemistry, 2010-03, Vol.285 (13), p.9683-9696

2010

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Functional and Structural Heterogeneity of the DNA Binding Site of the Escherichia coli Primary Replicative Helicase DnaB Protein

The Journal of biological chemistry, 1998-04, Vol.273 (15), p.9058-9069

1998

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Signal and binding. I. Physico-chemical response to macromolecule–ligand interactions

Biophysical chemistry, 2017-03, Vol.222, p.7-24

2017

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Signal and binding. II. Converting physico-chemical responses to macromolecule–ligand interactions into thermodynamic binding isotherms

Biophysical chemistry, 2017-03, Vol.222, p.25-40

2017

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Quantitative thermodynamic analyses of spectroscopic titration curves

Journal of molecular structure, 2014-12, Vol.1077, p.40-50

2014

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Binding Specificity of Escherichia coli Single-Stranded DNA Binding Protein for the χ Subunit of DNA pol III Holoenzyme and PriA Helicase

Biochemistry (Easton), 2010-05, Vol.49 (17), p.3555-3566

2010

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Co-operative Binding of Escherichia coli SSB Tetramers to Single-stranded DNA in the (SSB) 35 Binding Mode

Journal of molecular biology, 1994-02, Vol.236 (1), p.106-123

1994

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Interactions of the Escherichia coli Primosomal PriB Protein with the Single-stranded DNA. Stoichiometries, Intrinsic Affinities, Cooperativities, and Base Specificities

Journal of molecular biology, 2010-04, Vol.398 (1), p.8-25

2010

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Interactions of the DNA Polymerase X from African Swine Fever Virus with Gapped DNA Substrates. Quantitative Analysis of Functional Structures of the Formed Complexes

Biochemistry (Easton), 2007-11, Vol.46 (45), p.12909-12924

2007

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Expanding the physiological role of the hexameric DnaB helicase

Trends in biochemical sciences (Amsterdam. Regular ed.), 2003-03, Vol.28 (3), p.116-118

Bujalowski, Wlodzimierz

2003

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Macromolecular Competition Titration Method: Accessing Thermodynamics of the Unmodified Macromolecule–Ligand Interactions Through Spectroscopic Titrations of Fluorescent Analogs

Biothermodynamics, Part C, 2011, Vol.488, p.17-57

2011

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E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domain

Biochimica et biophysica acta, 2010-08, Vol.1799 (8), p.588-596

2010

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Full-length Dengue virus RNA-dependent RNA polymerase-RNA/DNA complexes: stoichiometries, intrinsic affinities, cooperativities, base, and conformational specificities

The Journal of biological chemistry, 2011-09, Vol.286 (38), p.33095-33108

2011

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Escherichia coli Replicative Helicase PriA Protein-Single-stranded DNA Complex

The Journal of biological chemistry, 2000-09, Vol.275 (36), p.27865-27873

2000

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The N-Terminal Domain of the E. coli PriA Helicase Contains Both the DNA- and the Nucleotide-Binding Sites. Energetics of Domain-DNA Interactions and Allosteric Effect of the Nucleotide Cofactors

Biochemistry (Easton), 2011-10, Vol.50 (43), p.9167-9183

2011

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Nucleotide Control of Replication Initiation: NTPase Mechanisms of E.coli DnaB-DnaC Complex

Biophysical journal, 2009-02, Vol.96 (3), p.209a-209a

2009

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Identification of the viral RNA promoter stem loop A (SLA)-binding site on Zika virus polymerase NS5

Biochemical and Biophysical Characterization of the dsDNA Packaging Motor from the Lactococcus lactis Bacteriophage Asccphi28

The Escherichia coli Primosomal DnaT Protein Exists in Solution as a Monomer–Trimer Equilibrium System

Energetics of the Escherichia coli DnaT Protein Trimerization Reaction

Unzipping Mechanism of the Double-stranded DNA Unwinding by a Hexameric Helicase: Quantitative Analysis of the Rate of the dsDNA Unwinding, Processivity and Kinetic Step-size of the Escherichia coli DnaB Helicase Using Rapid Quench-flow Method

Binding of Two PriA–PriB Complexes to the Primosome Assembly Site Initiates Primosome Formation

Unzipping Mechanism of the Double-stranded DNA Unwinding by a Hexameric Helicase: The Effect of the 3′ Arm and the Stability of the dsDNA on the Unwinding Activity of the Escherichia coli DnaB Helicase

Thermodynamic and Kinetic Methods of Analyses of Protein−Nucleic Acid Interactions. From Simpler to More Complex Systems

Interactions between the Dengue Virus Polymerase NS5 and Stem-Loop A

The Escherichia coli PriA Helicase Specifically Recognizes Gapped DNA Substrates

Functional and Structural Heterogeneity of the DNA Binding Site of the Escherichia coli Primary Replicative Helicase DnaB Protein

Signal and binding. I. Physico-chemical response to macromolecule–ligand interactions

Signal and binding. II. Converting physico-chemical responses to macromolecule–ligand interactions into thermodynamic binding isotherms

Quantitative thermodynamic analyses of spectroscopic titration curves

Binding Specificity of Escherichia coli Single-Stranded DNA Binding Protein for the χ Subunit of DNA pol III Holoenzyme and PriA Helicase

Co-operative Binding of Escherichia coli SSB Tetramers to Single-stranded DNA in the (SSB) 35 Binding Mode

Interactions of the Escherichia coli Primosomal PriB Protein with the Single-stranded DNA. Stoichiometries, Intrinsic Affinities, Cooperativities, and Base Specificities

Interactions of the DNA Polymerase X from African Swine Fever Virus with Gapped DNA Substrates. Quantitative Analysis of Functional Structures of the Formed Complexes

Expanding the physiological role of the hexameric DnaB helicase

Macromolecular Competition Titration Method: Accessing Thermodynamics of the Unmodified Macromolecule–Ligand Interactions Through Spectroscopic Titrations of Fluorescent Analogs

E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domain

Full-length Dengue virus RNA-dependent RNA polymerase-RNA/DNA complexes: stoichiometries, intrinsic affinities, cooperativities, base, and conformational specificities

Escherichia coli Replicative Helicase PriA Protein-Single-stranded DNA Complex

The N-Terminal Domain of the E. coli PriA Helicase Contains Both the DNA- and the Nucleotide-Binding Sites. Energetics of Domain-DNA Interactions and Allosteric Effect of the Nucleotide Cofactors

Nucleotide Control of Replication Initiation: NTPase Mechanisms of E.coli DnaB-DnaC Complex

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