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All of gene expression (AOE): An integrated index for public gene expression databases

PloS one, 2020-01, Vol.15 (1), p.e0227076-e0227076

2020

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Meta-Analysis of Oxidative Transcriptomes in Insects

Antioxidants, 2021-02, Vol.10 (3), p.345

Bono, Hidemasa

2021

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Meta-Analysis of Heat-Stressed Transcriptomes Using the Public Gene Expression Database from Human and Mouse Samples

International journal of molecular sciences, 2023-09, Vol.24 (17), p.13444

2023

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Meta-Analysis of Public RNA Sequencing Data Revealed Potential Key Genes Associated with Reproductive Division of Labor in Social Hymenoptera and Termites

International journal of molecular sciences, 2023-05, Vol.24 (9), p.8353

2023

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Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution

BMC microbiology, 2021-01, Vol.21 (1), p.35-35, Article 35

2021

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Meta-Analysis of RNA Sequencing Data of Arabidopsis and Rice under Hypoxia

Life (Basel, Switzerland), 2022-07, Vol.12 (7), p.1079

2022

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Inhibiting SARS-CoV-2 infection in vitro by suppressing its receptor, angiotensin-converting enzyme 2, via aryl-hydrocarbon receptor signal

Scientific reports, 2021-08, Vol.11 (1), p.1-12, Article 16629

2021

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Transcriptional Signatures of Domestication Revealed through Meta-Analysis of Pig, Chicken, Wild Boar, and Red Junglefowl Gene Expression Data

Animals (Basel), 2024-07, Vol.14 (13), p.1998

2024

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Meta-analysis of public RNA sequencing data of abscisic acid-related abiotic stresses in Arabidopsis thaliana

Frontiers in plant science, 2024, Vol.15, p.1343787-1343787

2024

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A systematic exploration of unexploited genes for oxidative stress in Parkinson’s disease

NPJ Parkinson's Disease, 2024-08, Vol.10 (1), p.160-10

2024

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Multi-Omic Meta-Analysis of Transcriptomes and the Bibliome Uncovers Novel Hypoxia-Inducible Genes

Biomedicines, 2021-05, Vol.9 (5), p.582

2021

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Triterpene RDF: Developing a database of plant enzymes and transcription factors involved in triterpene biosynthesis using the Resource Description Framework

Plant Biotechnology, 2024/09/25, Vol.41(3), pp.303-308

2024

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HIF-1-mediated suppression of mitochondria electron transport chain function confers resistance to lidocaine-induced cell death

Scientific reports, 2017-06, Vol.7 (1), p.3816-14, Article 3816

2017

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Meta-Analysis of Hypoxic Transcriptomes from Public Databases

Biomedicines, 2020-01, Vol.8 (1), p.10

2020

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Prediction of sex-determination mechanisms in avian primordial germ cells using RNA-seq analysis

Scientific reports, 2022-08, Vol.12 (1), p.13528-13528, Article 13528

2022

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Systematic Functional Annotation Workflow for Insects

Insects (Basel, Switzerland), 2022-06, Vol.13 (7), p.586

2022

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Genome-Wide Search for Gene Mutations Likely Conferring Insecticide Resistance in the Common Bed Bug, Cimex lectularius

Insects (Basel, Switzerland), 2024-09, Vol.15 (10), p.737

2024

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Exploratory meta-analysis of hypoxic transcriptomes using a precise transcript reference sequence set

Life science alliance, 2023-01, Vol.6 (1), p.e202201518

2023

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Meta-Analysis of the Public RNA-Seq Data of the Western Honeybee Apis mellifera to Construct Reference Transcriptome Data

Insects (Basel, Switzerland), 2022-10, Vol.13 (10), p.931

2022

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RefEx, a reference gene expression dataset as a web tool for the functional analysis of genes

Scientific data, 2017-08, Vol.4 (1), p.170105-170105, Article 170105

2017

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A highly contiguous genome assembly of red perilla (Perilla frutescens) domesticated in Japan

DNA research, 2023-02, Vol.30 (1)

2023

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An extract from the frass of swallowtail butterfly (Papilio machaon) larvae inhibits HCT116 colon cancer cell proliferation but not other cancer cell types

BMC genomics, 2023-12, Vol.24 (1), p.1-735, Article 735

2023

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GLIS1, a novel hypoxia-inducible transcription factor, promotes breast cancer cell motility via activation of WNT5A

Carcinogenesis (New York), 2020-09, Vol.41 (9), p.1184-1194

2020

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Reference Transcriptome Data in Silkworm Bombyx mori

Insects (Basel, Switzerland), 2021-06, Vol.12 (6), p.519

2021

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Characterization of brown adipose tissue thermogenesis in the naked mole-rat (Heterocephalus glaber), a heterothermic mammal

Scientific reports, 2020-11, Vol.10 (1), p.19488, Article 19488

2020

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All of gene expression (AOE): An integrated index for public gene expression databases

Meta-Analysis of Oxidative Transcriptomes in Insects

Meta-Analysis of Heat-Stressed Transcriptomes Using the Public Gene Expression Database from Human and Mouse Samples

Meta-Analysis of Public RNA Sequencing Data Revealed Potential Key Genes Associated with Reproductive Division of Labor in Social Hymenoptera and Termites

Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution

Meta-Analysis of RNA Sequencing Data of Arabidopsis and Rice under Hypoxia

Inhibiting SARS-CoV-2 infection in vitro by suppressing its receptor, angiotensin-converting enzyme 2, via aryl-hydrocarbon receptor signal

Transcriptional Signatures of Domestication Revealed through Meta-Analysis of Pig, Chicken, Wild Boar, and Red Junglefowl Gene Expression Data

Meta-analysis of public RNA sequencing data of abscisic acid-related abiotic stresses in Arabidopsis thaliana

A systematic exploration of unexploited genes for oxidative stress in Parkinson’s disease

Multi-Omic Meta-Analysis of Transcriptomes and the Bibliome Uncovers Novel Hypoxia-Inducible Genes

Triterpene RDF: Developing a database of plant enzymes and transcription factors involved in triterpene biosynthesis using the Resource Description Framework

HIF-1-mediated suppression of mitochondria electron transport chain function confers resistance to lidocaine-induced cell death

Meta-Analysis of Hypoxic Transcriptomes from Public Databases

Prediction of sex-determination mechanisms in avian primordial germ cells using RNA-seq analysis

Systematic Functional Annotation Workflow for Insects

Genome-Wide Search for Gene Mutations Likely Conferring Insecticide Resistance in the Common Bed Bug, Cimex lectularius

Exploratory meta-analysis of hypoxic transcriptomes using a precise transcript reference sequence set

Meta-Analysis of the Public RNA-Seq Data of the Western Honeybee Apis mellifera to Construct Reference Transcriptome Data

RefEx, a reference gene expression dataset as a web tool for the functional analysis of genes

A highly contiguous genome assembly of red perilla (Perilla frutescens) domesticated in Japan

An extract from the frass of swallowtail butterfly (Papilio machaon) larvae inhibits HCT116 colon cancer cell proliferation but not other cancer cell types

GLIS1, a novel hypoxia-inducible transcription factor, promotes breast cancer cell motility via activation of WNT5A

Reference Transcriptome Data in Silkworm Bombyx mori

Characterization of brown adipose tissue thermogenesis in the naked mole-rat (Heterocephalus glaber), a heterothermic mammal

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