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pcadapt: an R package to perform genome scans for selection based on principal component analysis

Molecular ecology resources, 2017-01, Vol.17 (1), p.67-77

2017

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abc: an R package for approximate Bayesian computation (ABC)

Methods in ecology and evolution, 2012-06, Vol.3 (3), p.475-479

2012

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Approximate Bayesian Computation: A Nonparametric Perspective

Journal of the American Statistical Association, 2010-09, Vol.105 (491), p.1178-1187

Blum, Michael G. B.

2010

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Genomic Variation in Seven Khoe-San Groups Reveals Adaptation and Complex African History

Science (American Association for the Advancement of Science), 2012-10, Vol.338 (6105), p.374-379

2012

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Approximate Bayesian Computation (ABC) in practice

Trends in ecology & evolution (Amsterdam), 2010-07, Vol.25 (7), p.410-418

2010

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Efficient Implementation of Penalized Regression for Genetic Risk Prediction

Genetics (Austin), 2019-05, Vol.212 (1), p.65-74

2019

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goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

Proceedings of the National Academy of Sciences - PNAS, 2008-11, Vol.105 (46), p.17659-17664

2008

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External control arm analysis: an evaluation of propensity score approaches, G-computation, and doubly debiased machine learning

BMC medical research methodology, 2022-12, Vol.22 (1), p.335-335, Article 335

2022

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Demographic history of european populations of Arabidopsis thaliana

PLoS genetics, 2008-05, Vol.4 (5), p.e1000075-e1000075

2008

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More efficient and inclusive time-to-event trials with covariate adjustment: a simulation study

Trials, 2023-06, Vol.24 (1), p.380-380, Article 380

2023

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Detecting Genomic Signatures of Natural Selection with Principal Component Analysis: Application to the 1000 Genomes Data

Molecular biology and evolution, 2016-04, Vol.33 (4), p.1082-1093

2016

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Genome scans for detecting footprints of local adaptation using a Bayesian factor model

Molecular biology and evolution, 2014-09, Vol.31 (9), p.2483-2495

2014

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Low levels of genetic divergence across geographically and linguistically diverse populations from India

PLoS genetics, 2006-12, Vol.2 (12), p.e215-e215

2006

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Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software

BMC bioinformatics, 2020-01, Vol.21 (1), p.16-16, Article 16

2020

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Taste perception and lifestyle: insights from phenotype and genome data among Africans and Asians

European journal of human genetics : EJHG, 2021-02, Vol.29 (2), p.325-337

2021

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Challenges Raised by Mediation Analysis in a High-Dimension Setting

Environmental health perspectives, 2020-05, Vol.128 (5), p.55001

2020

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Identifying outlier loci in admixed and in continuous populations using ancestral population differentiation statistics

Molecular ecology, 2016-10, Vol.25 (20), p.5029-5042

2016

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Efficient analysis of large-scale genome-wide data with two R packages: bigstatsr and bigsnpr

Bioinformatics, 2018-08, Vol.34 (16), p.2781-2787

2018

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Evaluation of redundancy analysis to identify signatures of local adaptation

Molecular ecology resources, 2018-11, Vol.18 (6), p.1223-1233

2018

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Predictions of native American population structure using linguistic covariates in a hidden regression framework

PloS one, 2011-01, Vol.6 (1), p.e16227-e16227

2011

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Which Random Processes Describe the Tree of Life? A Large-Scale Study of Phylogenetic Tree Imbalance

Systematic biology, 2006-08, Vol.55 (4), p.685-691

2006

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Performing Highly Efficient Genome Scans for Local Adaptation with R Package pcadapt Version 4

Molecular biology and evolution, 2020-07, Vol.37 (7), p.2153-2154

2020

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Matrilineal fertility inheritance detected in hunter-gatherer populations using the imbalance of gene genealogies

PLoS genetics, 2006-08, Vol.2 (8), p.e122-e122

2006

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Deep divergences of human gene trees and models of human origins

Molecular biology and evolution, 2011-02, Vol.28 (2), p.889-898

2011

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Making the Most of Clumping and Thresholding for Polygenic Scores

American journal of human genetics, 2019-12, Vol.105 (6), p.1213-1221

2019

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pcadapt: an R package to perform genome scans for selection based on principal component analysis

abc: an R package for approximate Bayesian computation (ABC)

Approximate Bayesian Computation: A Nonparametric Perspective

Genomic Variation in Seven Khoe-San Groups Reveals Adaptation and Complex African History

Approximate Bayesian Computation (ABC) in practice

Efficient Implementation of Penalized Regression for Genetic Risk Prediction

goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

External control arm analysis: an evaluation of propensity score approaches, G-computation, and doubly debiased machine learning

Demographic history of european populations of Arabidopsis thaliana

More efficient and inclusive time-to-event trials with covariate adjustment: a simulation study

Detecting Genomic Signatures of Natural Selection with Principal Component Analysis: Application to the 1000 Genomes Data

Genome scans for detecting footprints of local adaptation using a Bayesian factor model

Low levels of genetic divergence across geographically and linguistically diverse populations from India

Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software

Taste perception and lifestyle: insights from phenotype and genome data among Africans and Asians

Challenges Raised by Mediation Analysis in a High-Dimension Setting

Identifying outlier loci in admixed and in continuous populations using ancestral population differentiation statistics

Efficient analysis of large-scale genome-wide data with two R packages: bigstatsr and bigsnpr

Evaluation of redundancy analysis to identify signatures of local adaptation

Predictions of native American population structure using linguistic covariates in a hidden regression framework

Which Random Processes Describe the Tree of Life? A Large-Scale Study of Phylogenetic Tree Imbalance

Performing Highly Efficient Genome Scans for Local Adaptation with R Package pcadapt Version 4

Matrilineal fertility inheritance detected in hunter-gatherer populations using the imbalance of gene genealogies

Deep divergences of human gene trees and models of human origins

Making the Most of Clumping and Thresholding for Polygenic Scores

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