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Comparing de novo assemblers for 454 transcriptome data

BMC genomics, 2010-10, Vol.11 (1), p.571-571, Article 571

2010

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The promise of a DNA taxonomy

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2004-04, Vol.359 (1444), p.669

Blaxter, Mark L

2004

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Special features of RAD Sequencing data: implications for genotyping

Molecular ecology, 2013-06, Vol.22 (11), p.3151-3164

2013

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Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organism

PloS one, 2011-04, Vol.6 (4), p.e19315

2011

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Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages

PLoS biology, 2015-02, Vol.13 (2), p.e1002061-e1002061

2015

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KinFin: Software for Taxon-Aware Analysis of Clustered Protein Sequences

G3 : genes - genomes - genetics, 2017-10, Vol.7 (10), p.3349-3357

2017

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Silencing of Germline-Expressed Genes by DNA Elimination in Somatic Cells

Developmental cell, 2012-11, Vol.23 (5), p.1072-1080

2012

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Formin Is Associated with Left-Right Asymmetry in the Pond Snail and the Frog

Current biology, 2016-03, Vol.26 (5), p.654-660

2016

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annot8r: GO, EC and KEGG annotation of EST datasets

BMC bioinformatics, 2008-04, Vol.9 (1), p.180-180, Article 180

2008

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Genome-wide patterns of divergence and gene flow across a butterfly radiation

Molecular ecology, 2013-02, Vol.22 (3), p.814-826

2013

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Analysis of gene expression from the Wolbachia genome of a filarial nematode supports both metabolic and defensive roles within the symbiosis

Genome research, 2012-12, Vol.22 (12), p.2467

2012

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The genome sequence of the Tipped Oak Case-bearer, Coleophora flavipennella (Duponchel 1843)

Wellcome open research, 2024, Vol.9, p.3-3

2024

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MarkerScan: Separation and assembly of cobionts sequenced alongside target species in biodiversity genomics projects

Wellcome open research, 2024, Vol.9, p.33-33

2024

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Chromosome-Wide Evolution and Sex Determination in the Three-Sexed Nematode Auanema rhodensis

G3 : genes - genomes - genetics, 2019-04, Vol.9 (4), p.1211-1230

2019

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Comparative Genomics of Apomictic Root-Knot Nematodes: Hybridization, Ploidy, and Dynamic Genome Change

Genome biology and evolution, 2017-10, Vol.9 (10), p.2844-2861

2017

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The complex hybrid origins of the root knot nematodes revealed through comparative genomics

PeerJ (San Francisco, CA), 2014-05, Vol.2, p.e356

2014

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A transcriptomic analysis of Echinococcus granulosus larval stages: implications for parasite biology and host adaptation

PLoS neglected tropical diseases, 2012-11, Vol.6 (11), p.e1897

2012

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The components of the Daphnia pulex immune system as revealed by complete genome sequencing

BMC genomics, 2009-04, Vol.10 (1), p.175-175

2009

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The phylogenetics of Anguillicolidae (Nematoda: Anguillicoloidea), swimbladder parasites of eels

BMC evolutionary biology, 2012-05, Vol.12, p.60

2012

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The genome sequence of the common earthworm, Lumbricus terrestris (Linnaeus, 1758)

Wellcome open research, 2023, Vol.8, p.500-500

2023

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Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon

BMC genomics, 2012-06, Vol.13 (1), p.244-244

2012

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Sex- and Gamete-Specific Patterns of X Chromosome Segregation in a Trioecious Nematode

Current biology, 2018-01, Vol.28 (1), p.93-99.e3

2018

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Polyploidy is widespread in Microsporidia

Microbiology spectrum, 2024-02, Vol.12 (2), p.e0366923-e0366923

2024

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Genome sequence of the root-knot nematode Meloidogyne luci

Journal of nematology, 2020-01, Vol.52 (1), p.1-5

2020

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Genome comparisons indicate recent transfer of wRi‐like Wolbachia between sister species Drosophila suzukii and D. subpulchrella

Ecology and evolution, 2017-11, Vol.7 (22), p.9391-9404

2017

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Comparing de novo assemblers for 454 transcriptome data

The promise of a DNA taxonomy

Special features of RAD Sequencing data: implications for genotyping

Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organism

Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages

KinFin: Software for Taxon-Aware Analysis of Clustered Protein Sequences

Silencing of Germline-Expressed Genes by DNA Elimination in Somatic Cells

Formin Is Associated with Left-Right Asymmetry in the Pond Snail and the Frog

annot8r: GO, EC and KEGG annotation of EST datasets

Genome-wide patterns of divergence and gene flow across a butterfly radiation

Analysis of gene expression from the Wolbachia genome of a filarial nematode supports both metabolic and defensive roles within the symbiosis

The genome sequence of the Tipped Oak Case-bearer, Coleophora flavipennella (Duponchel 1843)

MarkerScan: Separation and assembly of cobionts sequenced alongside target species in biodiversity genomics projects

Chromosome-Wide Evolution and Sex Determination in the Three-Sexed Nematode Auanema rhodensis

Comparative Genomics of Apomictic Root-Knot Nematodes: Hybridization, Ploidy, and Dynamic Genome Change

The complex hybrid origins of the root knot nematodes revealed through comparative genomics

A transcriptomic analysis of Echinococcus granulosus larval stages: implications for parasite biology and host adaptation

The components of the Daphnia pulex immune system as revealed by complete genome sequencing

The phylogenetics of Anguillicolidae (Nematoda: Anguillicoloidea), swimbladder parasites of eels

The genome sequence of the common earthworm, Lumbricus terrestris (Linnaeus, 1758)

Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon

Sex- and Gamete-Specific Patterns of X Chromosome Segregation in a Trioecious Nematode

Polyploidy is widespread in Microsporidia

Genome sequence of the root-knot nematode Meloidogyne luci

Genome comparisons indicate recent transfer of wRi‐like Wolbachia between sister species Drosophila suzukii and D. subpulchrella

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