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Compendium of human transcription factor effector domains

Molecular cell, 2022-02, Vol.82 (3), p.514-526

2022

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Using networks to measure similarity between genes: association index selection

Nature methods, 2013-12, Vol.10 (12), p.1169-1176

2013

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Human gene-centered transcription factor networks for enhancers and disease variants

Cell, 2015-04, Vol.161 (3), p.661-673

2015

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Genome-wide characterization of human minisatellite VNTRs: population-specific alleles and gene expression differences

Nucleic acids research, 2021-05, Vol.49 (8), p.4308-4324

2021

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A functional screen identifies transcriptional networks that regulate HIV-1 and HIV-2

Proceedings of the National Academy of Sciences - PNAS, 2021-03, Vol.118 (11), p.1-8

2021

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Intragenic proviral elements support transcription of defective HIV-1 proviruses

PLoS pathogens, 2021-12, Vol.17 (12), p.e1009982-e1009982

2021

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Essential role of a ThPOK autoregulatory loop in the maintenance of mature CD4 + T cell identity and function

Nature immunology, 2021-08, Vol.22 (8), p.969-982

2021

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Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities

eLife, 2015-04, Vol.4

2015

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Human Virus Transcriptional Regulators

Cell, 2020-07, Vol.182 (1), p.24-37

2020

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Identification of Single Nucleotide Non-coding Driver Mutations in Cancer

Frontiers in genetics, 2018-02, Vol.9, p.16-16

2018

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Widespread macromolecular interaction perturbations in human genetic disorders

Cell, 2015-04, Vol.161 (3), p.647-660

2015

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Viral cis-regulatory elements as sensors of cellular states and environmental cues

Trends in genetics, 2024-09, Vol.40 (9), p.772-783

2024

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Identification of conserved skeletal enhancers associated with craniosynostosis risk genes

Human molecular genetics, 2024-05, Vol.33 (10), p.837-849

2024

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Transcription factors in the development and treatment of immune disorders

Transcription, 2023-12, p.1-23

2023

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Theory and Application of Network Biology Toward Precision Medicine

Journal of molecular biology, 2018-09, Vol.430 (18), p.2873-2874

2018

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Comprehensive mapping of the human cytokine gene regulatory network

Nucleic acids research, 2020-12, Vol.48 (21), p.12055-12073

2020

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Paired yeast one-hybrid assays to detect DNA-binding cooperativity and antagonism across transcription factors

Nature communications, 2023-10, Vol.14 (1), p.6570-6570, Article 6570

2023

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Options and Considerations When Using a Yeast One-Hybrid System

Methods in molecular biology (Clifton, N.J.), 2018, Vol.1794, p.119

2018

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A gene‐centered C. elegans protein–DNA interaction network provides a framework for functional predictions

Molecular systems biology, 2016-10, Vol.12 (10), p.884-n/a

2016

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Therapeutic Targeting of Transcription Factors to Control the Cytokine Release Syndrome in COVID-19

Frontiers in pharmacology, 2021-06, Vol.12, p.673485

2021

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Transcription factor binding to Caenorhabditis elegans first introns reveals lack of redundancy with gene promoters

Nucleic acids research, 2014-01, Vol.42 (1), p.153-162

2014

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Zymolyase-Treatment and Polymerase Chain Reaction Amplification from Genomic and Plasmid Templates from Yeast

Cold Spring Harbor protocols, 2016-12, Vol.2016 (12), p.pdb.prot088971

2016

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Gene-Centered Yeast One-Hybrid Assays

Cold Spring Harbor protocols, 2016-12, Vol.2016 (12), p.pdb.top077669

2016

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Generating Bait Strains for Yeast One-Hybrid Assays

Cold Spring Harbor protocols, 2016-12, Vol.2016 (12), p.pdb.prot088948

2016

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Flagellin delays spontaneous human neutrophil apoptosis

Laboratory investigation, 2010-07, Vol.90 (7), p.1049-1059

2010

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Compendium of human transcription factor effector domains

Using networks to measure similarity between genes: association index selection

Human gene-centered transcription factor networks for enhancers and disease variants

Genome-wide characterization of human minisatellite VNTRs: population-specific alleles and gene expression differences

A functional screen identifies transcriptional networks that regulate HIV-1 and HIV-2

Intragenic proviral elements support transcription of defective HIV-1 proviruses

Essential role of a ThPOK autoregulatory loop in the maintenance of mature CD4 + T cell identity and function

Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities

Human Virus Transcriptional Regulators

Identification of Single Nucleotide Non-coding Driver Mutations in Cancer

Widespread macromolecular interaction perturbations in human genetic disorders

Viral cis-regulatory elements as sensors of cellular states and environmental cues

Identification of conserved skeletal enhancers associated with craniosynostosis risk genes

Transcription factors in the development and treatment of immune disorders

Theory and Application of Network Biology Toward Precision Medicine

Comprehensive mapping of the human cytokine gene regulatory network

Paired yeast one-hybrid assays to detect DNA-binding cooperativity and antagonism across transcription factors

Options and Considerations When Using a Yeast One-Hybrid System

A gene‐centered C. elegans protein–DNA interaction network provides a framework for functional predictions

Therapeutic Targeting of Transcription Factors to Control the Cytokine Release Syndrome in COVID-19

Transcription factor binding to Caenorhabditis elegans first introns reveals lack of redundancy with gene promoters

Zymolyase-Treatment and Polymerase Chain Reaction Amplification from Genomic and Plasmid Templates from Yeast

Gene-Centered Yeast One-Hybrid Assays

Generating Bait Strains for Yeast One-Hybrid Assays

Flagellin delays spontaneous human neutrophil apoptosis

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