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Site identification in high-throughput RNA―protein interaction data

Bioinformatics, 2012-12, Vol.28 (23), p.3013-3020

2012

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Computational challenges, tools, and resources for analyzing co- and post-transcriptional events in high throughput

Wiley interdisciplinary reviews. RNA, 2015-05, Vol.6 (3), p.291-310

2015

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Transcriptional regulatory control of mammalian nephron progenitors revealed by multi-factor cistromic analysis and genetic studies

PLoS genetics, 2018-01, Vol.14 (1), p.e1007181-e1007181

2018

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Discovery of Allele-Specific Protein-RNA Interactions in Human Transcriptomes

American journal of human genetics, 2019-03, Vol.104 (3), p.492-502

2019

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43308 Non-invasive detection of RNAs associated with basal cell carcinoma (BCC)

Journal of the American Academy of Dermatology, 2023-09, Vol.89 (3), p.AB199-AB199

2023

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Detecting Allele-Specific Alternative Splicing from Population-Scale RNA-Seq Data

American journal of human genetics, 2020-09, Vol.107 (3), p.461-472

2020

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Rbfox Proteins Regulate Splicing as Part of a Large Multiprotein Complex LASR

Cell, 2016-04, Vol.165 (3), p.606-619

2016

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Using RNA-Seq to Discover Genetic Polymorphisms That Produce Hidden Splice Variants

Methods in molecular biology (Clifton, N.J.), 2017-01, Vol.1648, p.129

2017

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Prevalence of genetic disease carriers among patients seeking fertility treatment

Fertility and sterility, 2019-09, Vol.112 (3), p.e258-e258

2019

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αCP binding to a cytosine-rich subset of polypyrimidine tracts drives a novel pathway of cassette exon splicing in the mammalian transcriptome

Nucleic acids research, 2016-03, Vol.44 (5), p.2283

2016

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Discover hidden splicing variations by mapping personal transcriptomes to personal genomes

Nucleic acids research, 2015-12, Vol.43 (22), p.10612

2015

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Analytical validation of a novel panel of biomarkers for a test for preeclampsia

Journal of pharmaceutical and biomedical analysis, 2022-05, Vol.214, p.114729-114729, Article 114729

2022

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Leveraging cross-link modification events in CLIP-seq for motif discovery

Nucleic acids research, 2015-01, Vol.43 (1), p.95

2015

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High-throughput analyses of hnRNP H1 dissects its multi-functional aspect

RNA biology, 2016-04, Vol.13 (4), p.400-411

2016

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RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma

Molecular and cellular biology, 2015-09, Vol.35 (17), p.2965-2978

2015

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Probabilistic Modeling and Data Integration to Examine RNA-Protein Interactions

Bahrami-Samani, Emad

2015

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ProQuest

RNA Structural Motif Discovery using Probabilistic Tree Adjoining Grammars

Bahrami Samani, Emad

2009

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A Novel Hybrid GMM/SVM Architecture for Protein Secondary Structure Prediction

Applications of Fuzzy Sets Theory, p.491-496

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Site identification in high-throughput RNA―protein interaction data

Computational challenges, tools, and resources for analyzing co- and post-transcriptional events in high throughput

Transcriptional regulatory control of mammalian nephron progenitors revealed by multi-factor cistromic analysis and genetic studies

Discovery of Allele-Specific Protein-RNA Interactions in Human Transcriptomes

43308 Non-invasive detection of RNAs associated with basal cell carcinoma (BCC)

Detecting Allele-Specific Alternative Splicing from Population-Scale RNA-Seq Data

Rbfox Proteins Regulate Splicing as Part of a Large Multiprotein Complex LASR

Using RNA-Seq to Discover Genetic Polymorphisms That Produce Hidden Splice Variants

Prevalence of genetic disease carriers among patients seeking fertility treatment

αCP binding to a cytosine-rich subset of polypyrimidine tracts drives a novel pathway of cassette exon splicing in the mammalian transcriptome

Discover hidden splicing variations by mapping personal transcriptomes to personal genomes

Analytical validation of a novel panel of biomarkers for a test for preeclampsia

Leveraging cross-link modification events in CLIP-seq for motif discovery

High-throughput analyses of hnRNP H1 dissects its multi-functional aspect

RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma

Probabilistic Modeling and Data Integration to Examine RNA-Protein Interactions

RNA Structural Motif Discovery using Probabilistic Tree Adjoining Grammars

A Novel Hybrid GMM/SVM Architecture for Protein Secondary Structure Prediction

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