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PacBio Sequencing and Its Applications

Genomics, proteomics & bioinformatics, 2015-10, Vol.13 (5), p.278-289

2015

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Activation of Innate Immunity Is Required for Efficient Nuclear Reprogramming

Cell, 2012-10, Vol.151 (3), p.547-558

2012

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Human tRNA synthetase catalytic nulls with diverse functions

Science (American Association for the Advancement of Science), 2014-07, Vol.345 (6194), p.328-332

2014

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The blooming of long-read sequencing reforms biomedical research

Genome Biology, 2022-01, Vol.23 (1), p.21-4, Article 21

Au, Kin Fai

2022

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A comparative evaluation of hybrid error correction methods for error-prone long reads

Genome Biology, 2019-02, Vol.20 (1), p.26-17, Article 26

2019

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Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm

Nature communications, 2021-03, Vol.12 (1), p.1361-1361, Article 1361

2021

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Lysine Methylation as a Routine Rescue Strategy for Protein Crystallization

Structure (London), 2006-11, Vol.14 (11), p.1617-1622

2006

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Performance difference of graph-based and alignment-based hybrid error correction methods for error-prone long reads

Genome Biology, 2020-01, Vol.21 (1), p.14-14, Article 14

2020

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Full‐length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues of Salvia miltiorrhiza and tanshinone biosynthesis

The Plant journal : for cell and molecular biology, 2015-06, Vol.82 (6), p.951-961

2015

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Improving PacBio long read accuracy by short read alignment

PloS one, 2012-10, Vol.7 (10), p.e46679-e46679

2012

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Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

Nature communications, 2017-07, Vol.8 (1), p.59-59, Article 59

2017

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A network-based computational framework to predict and differentiate functions for gene isoforms using exon-level expression data

Methods (San Diego, Calif.), 2021-05, Vol.189, p.54-64

2021

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One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008678-e1008678

2021

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Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis [version 2; peer review: 2 approved]

F1000 research, 2017, Vol.6, p.100

2017

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Characterization of the human ESC transcriptome by hybrid sequencing

Proceedings of the National Academy of Sciences - PNAS, 2013-12, Vol.110 (50), p.E4821-E4830

2013

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The primate-specific noncoding RNA HPAT5 regulates pluripotency during human preimplantation development and nuclear reprogramming

Nature genetics, 2016-01, Vol.48 (1), p.44-52

2016

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IDP-ASE: haplotyping and quantifying allele-specific expression at the gene and gene isoform level by hybrid sequencing

Nucleic acids research, 2017-03, Vol.45 (5), p.e32

2017

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Single-molecule long-read sequencing reveals the chromatin basis of gene expression

Genome research, 2019-08, Vol.29 (8), p.1329

2019

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Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing

Nucleic acids research, 2015-10, Vol.43 (18), p.e116

2015

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E-C coupling structural protein junctophilin-2 encodes a stress-adaptive transcription regulator

Science (American Association for the Advancement of Science), 2018-12, Vol.362 (6421)

2018

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ALS-associated mutation FUS-R521C causes DNA damage and RNA splicing defects

The Journal of clinical investigation, 2014-03, Vol.124 (3), p.981-999

2014

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RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development

Genome research, 2013-01, Vol.23 (1), p.201

2013

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Real-time resolution of short-read assembly graph using ONT long reads

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008586-e1008586

2021

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An Oct4‐Sall4‐Nanog network controls developmental progression in the pre‐implantation mouse embryo

Molecular systems biology, 2013, Vol.9 (1), p.632-n/a

2013

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A Statistical Method for Observing Personal Diploid Methylomes and Transcriptomes with Single-Molecule Real-Time Sequencing

Genes, 2018-09, Vol.9 (9), p.460

2018

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PacBio Sequencing and Its Applications

Activation of Innate Immunity Is Required for Efficient Nuclear Reprogramming

Human tRNA synthetase catalytic nulls with diverse functions

The blooming of long-read sequencing reforms biomedical research

A comparative evaluation of hybrid error correction methods for error-prone long reads

Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm

Lysine Methylation as a Routine Rescue Strategy for Protein Crystallization

Performance difference of graph-based and alignment-based hybrid error correction methods for error-prone long reads

Full‐length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues of Salvia miltiorrhiza and tanshinone biosynthesis

Improving PacBio long read accuracy by short read alignment

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

A network-based computational framework to predict and differentiate functions for gene isoforms using exon-level expression data

One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads

Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis [version 2; peer review: 2 approved]

Characterization of the human ESC transcriptome by hybrid sequencing

The primate-specific noncoding RNA HPAT5 regulates pluripotency during human preimplantation development and nuclear reprogramming

IDP-ASE: haplotyping and quantifying allele-specific expression at the gene and gene isoform level by hybrid sequencing

Single-molecule long-read sequencing reveals the chromatin basis of gene expression

Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing

E-C coupling structural protein junctophilin-2 encodes a stress-adaptive transcription regulator

ALS-associated mutation FUS-R521C causes DNA damage and RNA splicing defects

RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development

Real-time resolution of short-read assembly graph using ONT long reads

An Oct4‐Sall4‐Nanog network controls developmental progression in the pre‐implantation mouse embryo

A Statistical Method for Observing Personal Diploid Methylomes and Transcriptomes with Single-Molecule Real-Time Sequencing

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