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The fate and lifespan of human monocyte subsets in steady state and systemic inflammation

The Journal of experimental medicine, 2017-07, Vol.214 (7), p.1913-1923

2017

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Properties of MHC class I presented peptides that enhance immunogenicity

PLoS computational biology, 2013-10, Vol.9 (10), p.e1003266-e1003266

2013

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Human neutrophil kinetics: modeling of stable isotope labeling data supports short blood neutrophil half-lives

Blood, 2016-06, Vol.127 (26), p.3431-3438

2016

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An enriched network motif family regulates multistep cell fate transitions with restricted reversibility

PLoS computational biology, 2019-03, Vol.15 (3), p.e1006855-e1006855

2019

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The evolutionary selective advantage of HIV-1 escape variants and the contribution of escape to the HLA-associated risk of AIDS progression

PloS one, 2008-10, Vol.3 (10), p.e3486-e3486

2008

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From affinity selection to kinetic selection in Germinal Centre modelling

PLoS computational biology, 2022-06, Vol.18 (6), p.e1010168-e1010168

2022

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Viral surface geometry shapes influenza and coronavirus spike evolution through antibody pressure

PLoS computational biology, 2021-12, Vol.17 (12), p.e1009664-e1009664

2021

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Modeling the Slow CD4+ T Cell Decline in HIV-Infected Individuals

PLoS computational biology, 2015-12, Vol.11 (12), p.e1004665-e1004665

2015

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Analysis of hepatitis C virus decline during treatment with the protease inhibitor danoprevir using a multiscale model

PLoS computational biology, 2013-03, Vol.9 (3), p.e1002959-e1002959

2013

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MHC binding affects the dynamics of different T-cell receptors in different ways

PLoS computational biology, 2019-09, Vol.15 (9), p.e1007338-e1007338

2019

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The relative contributions of infectious and mitotic spread to HTLV-1 persistence

PLoS computational biology, 2020-09, Vol.16 (9), p.e1007470-e1007470

2020

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Rates of CTL killing in persistent viral infection in vivo

PLoS computational biology, 2014-04, Vol.10 (4), p.e1003534-e1003534

2014

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Heterogeneous CD8+ T cell migration in the lymph node in the absence of inflammation revealed by quantitative migration analysis

PLoS computational biology, 2015-02, Vol.11 (2), p.e1004058-e1004058

2015

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FAMoS: A Flexible and dynamic Algorithm for Model Selection to analyse complex systems dynamics

PLoS computational biology, 2019-08, Vol.15 (8), p.e1007230-e1007230

2019

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KIR-HLA interactions extend human CD8+ T cell lifespan in vivo

The Journal of clinical investigation, 2023-06, Vol.133 (12), p.1-14

2023

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Identifying the immune interactions underlying HLA class I disease associations

eLife, 2020-04, Vol.9

2020

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Different Selected Mechanisms Attenuated the Inhibitory Interaction of KIR2DL1 with C2 + HLA-C in Two Indigenous Human Populations in Southern Africa

The Journal of immunology (1950), 2018-04, Vol.200 (8), p.2640-2655

2018

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Differential T cell response against BK virus regulatory and structural antigens: A viral dynamics modelling approach

PLoS computational biology, 2018-05, Vol.14 (5), p.e1005998-e1005998

2018

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HIV-1 adaptation to NK cell-mediated immune pressure

PLoS pathogens, 2017-06, Vol.13 (6), p.e1006361-e1006361

2017

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HLA class I binding of HBZ determines outcome in HTLV-1 infection

PLoS pathogens, 2010-09, Vol.6 (9), p.e1001117-e1001117

2010

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Modeling the Effects of Morphine on Simian Immunodeficiency Virus Dynamics

PLoS computational biology, 2016-09, Vol.12 (9), p.e1005127-e1005127

2016

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Modelling T cell proliferation: Dynamics heterogeneity depending on cell differentiation, age, and genetic background

PLoS computational biology, 2017-03, Vol.13 (3), p.e1005417-e1005417

2017

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Quantification of HTLV-1 clonality and TCR diversity

PLoS computational biology, 2014-06, Vol.10 (6), p.e1003646-e1003646

2014

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CD57+ Memory T Cells Proliferate In Vivo

Cell reports (Cambridge), 2020-12, Vol.33 (11), p.108501, Article 108501

2020

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Power laws for heavy-tailed distributions: modeling allele and haplotype diversity for the national marrow donor program

PLoS computational biology, 2015-04, Vol.11 (4), p.e1004204-e1004204

2015

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The fate and lifespan of human monocyte subsets in steady state and systemic inflammation

Properties of MHC class I presented peptides that enhance immunogenicity

Human neutrophil kinetics: modeling of stable isotope labeling data supports short blood neutrophil half-lives

An enriched network motif family regulates multistep cell fate transitions with restricted reversibility

The evolutionary selective advantage of HIV-1 escape variants and the contribution of escape to the HLA-associated risk of AIDS progression

From affinity selection to kinetic selection in Germinal Centre modelling

Viral surface geometry shapes influenza and coronavirus spike evolution through antibody pressure

Modeling the Slow CD4+ T Cell Decline in HIV-Infected Individuals

Analysis of hepatitis C virus decline during treatment with the protease inhibitor danoprevir using a multiscale model

MHC binding affects the dynamics of different T-cell receptors in different ways

The relative contributions of infectious and mitotic spread to HTLV-1 persistence

Rates of CTL killing in persistent viral infection in vivo

Heterogeneous CD8+ T cell migration in the lymph node in the absence of inflammation revealed by quantitative migration analysis

FAMoS: A Flexible and dynamic Algorithm for Model Selection to analyse complex systems dynamics

KIR-HLA interactions extend human CD8+ T cell lifespan in vivo

Identifying the immune interactions underlying HLA class I disease associations

Different Selected Mechanisms Attenuated the Inhibitory Interaction of KIR2DL1 with C2 + HLA-C in Two Indigenous Human Populations in Southern Africa

Differential T cell response against BK virus regulatory and structural antigens: A viral dynamics modelling approach

HIV-1 adaptation to NK cell-mediated immune pressure

HLA class I binding of HBZ determines outcome in HTLV-1 infection

Modeling the Effects of Morphine on Simian Immunodeficiency Virus Dynamics

Modelling T cell proliferation: Dynamics heterogeneity depending on cell differentiation, age, and genetic background

Quantification of HTLV-1 clonality and TCR diversity

CD57+ Memory T Cells Proliferate In Vivo

Power laws for heavy-tailed distributions: modeling allele and haplotype diversity for the national marrow donor program

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