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pkCSM: Predicting Small-Molecule Pharmacokinetic and Toxicity Properties Using Graph-Based Signatures

Journal of medicinal chemistry, 2015-05, Vol.58 (9), p.4066-4072

2015

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DUET: a server for predicting effects of mutations on protein stability using an integrated computational approach

Nucleic acids research, 2014-07, Vol.42 (Web Server issue), p.W314-W319

2014

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SDM: a server for predicting effects of mutations on protein stability

Nucleic acids research, 2017-07, Vol.45 (W1), p.W229-W235

2017

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DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability

Nucleic acids research, 2018-07, Vol.46 (W1), p.W350-W355

2018

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mCSM: predicting the effects of mutations in proteins using graph-based signatures

Bioinformatics, 2014-02, Vol.30 (3), p.335-342

2014

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DynaMut2: Assessing changes in stability and flexibility upon single and multiple point missense mutations

Protein science, 2021-01, Vol.30 (1), p.60-69

2021

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MTR-Viewer: identifying regions within genes under purifying selection

Nucleic acids research, 2019-07, Vol.47 (W1), p.W121-W126

2019

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A structural biology community assessment of AlphaFold2 applications

Nature structural & molecular biology, 2022-11, Vol.29 (11), p.1056-1067

2022

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DNA-PKcs structure suggests an allosteric mechanism modulating DNA double-strand break repair

Science (American Association for the Advancement of Science), 2017-02, Vol.355 (6324), p.520-524

2017

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DDMut: predicting effects of mutations on protein stability using deep learning

Nucleic acids research, 2023-07, Vol.51 (W1), p.W122-W128

2023

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mmCSM-PPI: predicting the effects of multiple point mutations on protein-protein interactions

Nucleic acids research, 2021-07, Vol.49 (W1), p.W417-W424

2021

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Optimizing genomic medicine in epilepsy through a gene-customized approach to missense variant interpretation

Genome research, 2017-10, Vol.27 (10), p.1715-1729

2017

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Mercury methylation by metabolically versatile and cosmopolitan marine bacteria

The ISME Journal, 2021-06, Vol.15 (6), p.1810-1825

2021

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mCSM-lig: quantifying the effects of mutations on protein-small molecule affinity in genetic disease and emergence of drug resistance

Scientific reports, 2016-07, Vol.6 (1), p.29575-29575, Article 29575

2016

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Human LC3 and GABARAP subfamily members achieve functional specificity via specific structural modulations

Autophagy, 2020-02, Vol.16 (2), p.239-255

2020

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DDMut-PPI: predicting effects of mutations on protein–protein interactions using graph-based deep learning

Nucleic acids research, 2024-05, Vol.52 (W1), p.W207-W214

2024

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Identifying the Molecular Drivers of Pathogenic Aldehyde Dehydrogenase Missense Mutations in Cancer and Non-Cancer Diseases

International journal of molecular sciences, 2023-06, Vol.24 (12), p.10157

2023

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Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health

Progress in biophysics and molecular biology, 2017-09, Vol.128, p.3-13

2017

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Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam

Nature genetics, 2018-06, Vol.50 (6), p.849-856

2018

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Known allosteric proteins have central roles in genetic disease

PLoS computational biology, 2022-02, Vol.18 (2), p.e1009806-e1009806

2022

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Definition of the immune evasion-replication interface of rabies virus P protein

PLoS pathogens, 2021-07, Vol.17 (7), p.e1009729-e1009729

2021

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mCSM-AB2: guiding rational antibody design using graph-based signatures

Bioinformatics, 2020-03, Vol.36 (5), p.1453-1459

2020

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Structure guided prediction of Pyrazinamide resistance mutations in pncA

Scientific reports, 2020-02, Vol.10 (1), p.1875, Article 1875

2020

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Empirical ways to identify novel Bedaquiline resistance mutations in AtpE

PloS one, 2019-05, Vol.14 (5), p.e0217169

2019

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Platinum: a database of experimentally measured effects of mutations on structurally defined protein-ligand complexes

Nucleic acids research, 2015-01, Vol.43 (Database issue), p.D387-D391

2015

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pkCSM: Predicting Small-Molecule Pharmacokinetic and Toxicity Properties Using Graph-Based Signatures

DUET: a server for predicting effects of mutations on protein stability using an integrated computational approach

SDM: a server for predicting effects of mutations on protein stability

DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability

mCSM: predicting the effects of mutations in proteins using graph-based signatures

DynaMut2: Assessing changes in stability and flexibility upon single and multiple point missense mutations

MTR-Viewer: identifying regions within genes under purifying selection

A structural biology community assessment of AlphaFold2 applications

DNA-PKcs structure suggests an allosteric mechanism modulating DNA double-strand break repair

DDMut: predicting effects of mutations on protein stability using deep learning

mmCSM-PPI: predicting the effects of multiple point mutations on protein-protein interactions

Optimizing genomic medicine in epilepsy through a gene-customized approach to missense variant interpretation

Mercury methylation by metabolically versatile and cosmopolitan marine bacteria

mCSM-lig: quantifying the effects of mutations on protein-small molecule affinity in genetic disease and emergence of drug resistance

Human LC3 and GABARAP subfamily members achieve functional specificity via specific structural modulations

DDMut-PPI: predicting effects of mutations on protein–protein interactions using graph-based deep learning

Identifying the Molecular Drivers of Pathogenic Aldehyde Dehydrogenase Missense Mutations in Cancer and Non-Cancer Diseases

Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health

Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam

Known allosteric proteins have central roles in genetic disease

Definition of the immune evasion-replication interface of rabies virus P protein

mCSM-AB2: guiding rational antibody design using graph-based signatures

Structure guided prediction of Pyrazinamide resistance mutations in pncA

Empirical ways to identify novel Bedaquiline resistance mutations in AtpE

Platinum: a database of experimentally measured effects of mutations on structurally defined protein-ligand complexes

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