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Computational methods for protein identification from mass spectrometry data

PLoS computational biology, 2008-02, Vol.4 (2), p.e12-e12

2008

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Extensive Proliferation of Human Cancer Cells with Ever-Shorter Telomeres

Cell reports (Cambridge), 2017-06, Vol.19 (12), p.2544-2556

2017

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The temporal profile of activity-dependent presynaptic phospho-signalling reveals long-lasting patterns of poststimulus regulation

PLoS biology, 2019-03, Vol.17 (3), p.e3000170-e3000170

2019

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Automated classification and characterization of the mitotic spindle following knockdown of a mitosis-related protein

BMC bioinformatics, 2017-12, Vol.18 (Suppl 16), p.566-566, Article 566

2017

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MatCol: a tool to measure fluorescence signal colocalisation in biological systems

Scientific reports, 2017-08, Vol.7 (1), p.8879-9, Article 8879

2017

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Predicting peptide binding to Major Histocompatibility Complex molecules

Autoimmunity reviews, 2011-06, Vol.10 (8), p.469-473

2011

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Predicting peptide binding affinities to MHC molecules using a modified semi-empirical scoring function

PloS one, 2011-09, Vol.6 (9), p.e25055-e25055

2011

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Genetic screening of calcium regulation genes in familial hypertrophic cardiomyopathy

Journal of molecular and cellular cardiology, 2007-09, Vol.43 (3), p.337-343

2007

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Modeling single nucleotide polymorphisms in the human AKR1C1 and AKR1C2 genes: implications for functional and genotyping analyses

PloS one, 2010-12, Vol.5 (12), p.e15604-e15604

2010

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Limiting Thymic Precursor Supply Increases the Risk of Lymphoid Malignancy in Murine X-Linked Severe Combined Immunodeficiency

Molecular therapy. Nucleic acids, 2017-03, Vol.6, p.1-14

2017

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A novel cause of DKC1‐related bone marrow failure: Partial deletion of the 3′ untranslated region

EJHaem, 2021-05, Vol.2 (2), p.157-166

2021

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Reactive Oxygen Species (ROS)-Activated ATM-Dependent Phosphorylation of Cytoplasmic Substrates Identified by Large-Scale Phosphoproteomics Screen

Molecular & cellular proteomics, 2016-03, Vol.15 (3), p.1032-1047

2016

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Harvest: an open-source tool for the validation and improvement of peptide identification metrics and fragmentation exploration

BMC bioinformatics, 2010-09, Vol.11 (1), p.448-448, Article 448

2010

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Comparative analysis of whole genome sequencing-based telomere length measurement techniques

Methods (San Diego, Calif.), 2017-02, Vol.114, p.4-15

2017

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Novel approaches to detect serum biomarkers for clinical response to interferon-beta treatment in multiple sclerosis

PloS one, 2010-05, Vol.5 (5), p.e10484-e10484

2010

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Delayed recruiting of TPD52 to lipid droplets - evidence for a "second wave" of lipid droplet-associated proteins that respond to altered lipid storage induced by Brefeldin A treatment

Scientific reports, 2019-07, Vol.9 (1), p.9790-21, Article 9790

2019

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Is cell culture a risky business? Risk analysis based on scientist survey data

International journal of cancer, 2016-02, Vol.138 (3), p.664-670

2016

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Telomerase promotes formation of a telomere protective complex in cancer cells

Science advances, 2019-10, Vol.5 (10), p.eaav4409-eaav4409

2019

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Single nucleotide differences (SNDs) in the dbSNP database may lead to errors in genotyping and haplotyping studies

Human mutation, 2010, Vol.31 (1), p.67-73

2010

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Single Nucleotide Differences (SNDs) Continue to Contaminate the dbSNP Database With Consequences for Human Genomics and Health

Human mutation, 2015-02, Vol.36 (2), p.196-199

2015

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BioManager: the use of a bioinformatics web application as a teaching tool in undergraduate bioinformatics training

Briefings in bioinformatics, 2007-11, Vol.8 (6), p.457-465

2007

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Scoring of predicted GRK2 phosphorylation sites in Nedd4-2

Bioinformatics, 2006-09, Vol.22 (18), p.2192-2195

2006

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Identification and characterization of microbial proteins using peptide mass fingerprinting strategies

Methods in molecular medicine, 2008, Vol.141, p.257

Arthur, Jonathan W

2008

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BAFF is a biological response marker to IFN-beta treatment in multiple sclerosis

Journal of interferon & cytokine research, 2008-09, Vol.28 (9), p.529

2008

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Using Proteomics to Mine Genome Sequences

Journal of proteome research, 2004-05, Vol.3 (3), p.393-402

2004

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Computational methods for protein identification from mass spectrometry data

Extensive Proliferation of Human Cancer Cells with Ever-Shorter Telomeres

The temporal profile of activity-dependent presynaptic phospho-signalling reveals long-lasting patterns of poststimulus regulation

Automated classification and characterization of the mitotic spindle following knockdown of a mitosis-related protein

MatCol: a tool to measure fluorescence signal colocalisation in biological systems

Predicting peptide binding to Major Histocompatibility Complex molecules

Predicting peptide binding affinities to MHC molecules using a modified semi-empirical scoring function

Genetic screening of calcium regulation genes in familial hypertrophic cardiomyopathy

Modeling single nucleotide polymorphisms in the human AKR1C1 and AKR1C2 genes: implications for functional and genotyping analyses

Limiting Thymic Precursor Supply Increases the Risk of Lymphoid Malignancy in Murine X-Linked Severe Combined Immunodeficiency

A novel cause of DKC1‐related bone marrow failure: Partial deletion of the 3′ untranslated region

Reactive Oxygen Species (ROS)-Activated ATM-Dependent Phosphorylation of Cytoplasmic Substrates Identified by Large-Scale Phosphoproteomics Screen

Harvest: an open-source tool for the validation and improvement of peptide identification metrics and fragmentation exploration

Comparative analysis of whole genome sequencing-based telomere length measurement techniques

Novel approaches to detect serum biomarkers for clinical response to interferon-beta treatment in multiple sclerosis

Delayed recruiting of TPD52 to lipid droplets - evidence for a "second wave" of lipid droplet-associated proteins that respond to altered lipid storage induced by Brefeldin A treatment

Is cell culture a risky business? Risk analysis based on scientist survey data

Telomerase promotes formation of a telomere protective complex in cancer cells

Single nucleotide differences (SNDs) in the dbSNP database may lead to errors in genotyping and haplotyping studies

Single Nucleotide Differences (SNDs) Continue to Contaminate the dbSNP Database With Consequences for Human Genomics and Health

BioManager: the use of a bioinformatics web application as a teaching tool in undergraduate bioinformatics training

Scoring of predicted GRK2 phosphorylation sites in Nedd4-2

Identification and characterization of microbial proteins using peptide mass fingerprinting strategies

BAFF is a biological response marker to IFN-beta treatment in multiple sclerosis

Using Proteomics to Mine Genome Sequences

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