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Reannotation of Genomes by Means of Proteomics Data

Methods in enzymology, 2017, Vol.585, p.201-216

Armengaud, J

2017

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In Vino Veritas: An Invitation for Ambitious, Collaborative Proteogenomics Campaigns on Plant and Animal Models

Proteomics (Weinheim), 2017-11, Vol.17 (21), p.n/a

Armengaud, Jean

2017

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Stimulation of Distinct Rhizosphere Bacteria Drives Phosphorus and Nitrogen Mineralization in Oilseed Rape under Field Conditions

mSystems, 2022-08, Vol.7 (4), p.e0002522

2022

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Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry

Frontiers in microbiology, 2019-09, Vol.10, p.1985-1985

2019

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Cysteine Proteome Reveals Response to Endogenous Oxidative Stress in Bacillus cereus

International journal of molecular sciences, 2021-07, Vol.22 (14), p.7550

2021

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From the soil to the seeds: the long journey of nitrate in plants

Journal of experimental botany, 2011-02, Vol.62 (4), p.1349-1359

2011

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Proteotyping SARS-CoV‑2 Virus from Nasopharyngeal Swabs: A Proof-of-Concept Focused on a 3 Min Mass Spectrometry Window

Journal of proteome research, 2020-11, Vol.19 (11), p.4407-4416

2020

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Shortlisting SARS‐CoV‐2 Peptides for Targeted Studies from Experimental Data‐Dependent Acquisition Tandem Mass Spectrometry Data

Proteomics (Weinheim), 2020-07, Vol.20 (14), p.e2000107-n/a

2020

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Analysis of the Root System Architecture of Arabidopsis Provides a Quantitative Readout of Crosstalk between Nutritional Signals

The Plant cell, 2014-04, Vol.26 (4), p.1480-1496

2014

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Ecotoxicoproteomics: A decade of progress in our understanding of anthropogenic impact on the environment

Journal of proteomics, 2019-04, Vol.198, p.66-77

2019

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Estimating relative biomasses of organisms in microbiota using "phylopeptidomics"

Microbiome, 2020-03, Vol.8 (1), p.30-30, Article 30

2020

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Advanced Proteomics as a Powerful Tool for Studying Toxins of Human Bacterial Pathogens

Toxins, 2019-10, Vol.11 (10), p.576

2019

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The timeline of corona formation around silica nanocarriers highlights the role of the protein interactome

Nanoscale, 2017, Vol.9 (5), p.1840-1851

2017

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Constraining the mass of light bosonic dark matter using SDSS Lyman-α forest

Monthly notices of the Royal Astronomical Society, 2017-11, Vol.471 (4), p.4606-4614

2017

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C-terminal proteolysis of the collagen VI α3 chain by BMP-1 and proprotein convertase(s) releases endotrophin in fragments of different sizes

The Journal of biological chemistry, 2019-09, Vol.294 (37), p.13769-13780

2019

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First two autochthonous dengue virus infections in metropolitan France, September 2010

Euro surveillance : bulletin européen sur les maladies transmissibles, 2010-09, Vol.15 (39), p.1

2010

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Redox proteomic study of Bacillus cereus thiol proteome during fermentative anaerobic growth

BMC genomics, 2021-09, Vol.22 (1), p.1-648, Article 648

2021

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Primary sources of PM2.5 organic aerosol in an industrial Mediterranean city, Marseille

Atmospheric chemistry and physics, 2011-03, Vol.11 (5), p.2039-2058

2011

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Vaccines inducing immunity to Lassa virus glycoprotein and nucleoprotein protect macaques after a single shot

Science translational medicine, 2019-10, Vol.11 (512)

2019

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Next-Generation Proteomics: Toward Customized Biomarkers for Environmental Biomonitoring

Environmental science & technology, 2014-12, Vol.48 (23), p.13560-13572

2014

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The immune system of the freshwater zebra mussel, Dreissena polymorpha, decrypted by proteogenomics of hemocytes and plasma compartments

Journal of proteomics, 2019-06, Vol.202, p.103366-103366, Article 103366

2019

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Non-model organisms, a species endangered by proteogenomics

Journal of proteomics, 2014-06, Vol.105, p.5-18

2014

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High-throughput proteotyping of bacterial isolates by double barrel chromatography-tandem mass spectrometry based on microplate paramagnetic beads and phylopeptidomics

Journal of proteomics, 2020-08, Vol.226, p.103887-103887, Article 103887

2020

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Lysine-specific acetylated proteome from the archaeon Thermococcus gammatolerans reveals the presence of acetylated histones

Journal of proteomics, 2021-02, Vol.232, p.104044-104044, Article 104044

2021

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Expanding the Known Repertoire of Virulence Factors Produced by Bacillus cereus through Early Secretome Profiling in Three Redox Conditions

Molecular & cellular proteomics, 2010-07, Vol.9 (7), p.1486-1498

2010

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Reannotation of Genomes by Means of Proteomics Data

In Vino Veritas: An Invitation for Ambitious, Collaborative Proteogenomics Campaigns on Plant and Animal Models

Stimulation of Distinct Rhizosphere Bacteria Drives Phosphorus and Nitrogen Mineralization in Oilseed Rape under Field Conditions

Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry

Cysteine Proteome Reveals Response to Endogenous Oxidative Stress in Bacillus cereus

From the soil to the seeds: the long journey of nitrate in plants

Proteotyping SARS-CoV‑2 Virus from Nasopharyngeal Swabs: A Proof-of-Concept Focused on a 3 Min Mass Spectrometry Window

Shortlisting SARS‐CoV‐2 Peptides for Targeted Studies from Experimental Data‐Dependent Acquisition Tandem Mass Spectrometry Data

Analysis of the Root System Architecture of Arabidopsis Provides a Quantitative Readout of Crosstalk between Nutritional Signals

Ecotoxicoproteomics: A decade of progress in our understanding of anthropogenic impact on the environment

Estimating relative biomasses of organisms in microbiota using "phylopeptidomics"

Advanced Proteomics as a Powerful Tool for Studying Toxins of Human Bacterial Pathogens

The timeline of corona formation around silica nanocarriers highlights the role of the protein interactome

Constraining the mass of light bosonic dark matter using SDSS Lyman-α forest

C-terminal proteolysis of the collagen VI α3 chain by BMP-1 and proprotein convertase(s) releases endotrophin in fragments of different sizes

First two autochthonous dengue virus infections in metropolitan France, September 2010

Redox proteomic study of Bacillus cereus thiol proteome during fermentative anaerobic growth

Primary sources of PM2.5 organic aerosol in an industrial Mediterranean city, Marseille

Vaccines inducing immunity to Lassa virus glycoprotein and nucleoprotein protect macaques after a single shot

Next-Generation Proteomics: Toward Customized Biomarkers for Environmental Biomonitoring

The immune system of the freshwater zebra mussel, Dreissena polymorpha, decrypted by proteogenomics of hemocytes and plasma compartments

Non-model organisms, a species endangered by proteogenomics

High-throughput proteotyping of bacterial isolates by double barrel chromatography-tandem mass spectrometry based on microplate paramagnetic beads and phylopeptidomics

Lysine-specific acetylated proteome from the archaeon Thermococcus gammatolerans reveals the presence of acetylated histones

Expanding the Known Repertoire of Virulence Factors Produced by Bacillus cereus through Early Secretome Profiling in Three Redox Conditions

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