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Dynamic Modeling and Analysis of the Cross-Talk between Insulin/AKT and MAPK/ERK Signaling Pathways

PloS one, 2016-03, Vol.11 (3), p.e0149684-e0149684

2016

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Detection of biological switches using the method of Gröebner bases

BMC bioinformatics, 2019-11, Vol.20 (1), p.615-615, Article 615

Arkun, Yaman

2019

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Dynamics and control of the ERK signaling pathway: Sensitivity, bistability, and oscillations

PloS one, 2018-04, Vol.13 (4), p.e0195513-e0195513

2018

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Regulatory networks and complex interactions between the insulin and angiotensin II signalling systems: models and implications for hypertension and diabetes

PloS one, 2013-12, Vol.8 (12), p.e83640-e83640

2013

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Combining optimal control theory and molecular dynamics for protein folding

PloS one, 2012-01, Vol.7 (1), p.e29628-e29628

2012

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Plant-wide hierarchical optimization and control of an industrial hydrocracking process

Journal of process control, 2013-10, Vol.23 (9), p.1229-1240

2013

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Prediction of optimal folding routes of proteins that satisfy the principle of lowest entropy loss: dynamic contact maps and optimal control

PloS one, 2010-10, Vol.5 (10), p.e13275-e13275

2010

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Water and thermal management in PEM fuel cells using feasible humidity plots and model predictive controllers

Computers & chemical engineering, 2025-01, Vol.192, p.108905, Article 108905

2025

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Computers and chemical engineering virtual special issue in honor of Professor George Stephanopoulos

Computers & chemical engineering, 2022-10, Vol.166, p.107986, Article 107986

2022

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Economic Model Predictive Control of an Industrial Fluid Catalytic Cracker

Industrial & engineering chemistry research, 2014-11, Vol.53 (45), p.17696-17704

2014

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Quasi-Min-Max MPC algorithms for LPV systems

Automatica (Oxford), 2000-04, Vol.36 (4), p.527-540

2000

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Plant-wide optimization and control of an industrial diesel hydro-processing plant

Computers & chemical engineering, 2016-04, Vol.87, p.234-245

2016

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A dynamic non-isothermal model for a hydrocracking reactor: Model development by the method of continuous lumping and application to an industrial unit

Journal of process control, 2012-12, Vol.22 (10), p.1956-1965

2012

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Dynamic modeling and optimization of an industrial fluid catalytic cracker

Journal of process control, 2015-07, Vol.31, p.30-44

2015

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Real-Time Application of Scheduling Quasi-Min−Max Model Predictive Control to a Bench-Scale Neutralization Reactor

Industrial & engineering chemistry research, 2004-05, Vol.43 (11), p.2730-2735

2004

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ADCHEM 2009 Special Issue

Journal of process control, 2010-10, Vol.20 (9), p.967-968

2010

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Modeling and Analysis of the Cross-talk Regulators Between the AKT and ERK Signaling Pathways

IFAC-PapersOnLine, 2019, Vol.52 (1), p.520-525

Arkun, Yaman

2019

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Dynamic modeling of an industrial diesel hydroprocessing plant by the method of continuous lumping

Computers & chemical engineering, 2015-11, Vol.82, p.44-54

2015

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Optimization of Operations in Supply Chain Systems Using Hybrid Systems Approach and Model Predictive Control

Industrial & engineering chemistry research, 2006-09, Vol.45 (19), p.6493-6503

2006

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Modeling of an Industrial Delayed Coker Unit

Computer Aided Chemical Engineering, 2023, Vol.52, p.525-531

2023

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Feedforward and feedback linearization of nonlinear system and its implementation using internal model control (IMC)

Industrial & engineering chemistry research, 1988-10, Vol.27 (10), p.1822-1831

1988

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Determination of pair-wise inter-residue interaction forces from folding pathways and their implementation in coarse-grained folding prediction

Physical chemistry chemical physics : PCCP, 2009-01, Vol.11 (12), p.1949-1961

2009

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A new approach to defining a dynamic relative gain

Control engineering practice, 2003-08, Vol.11 (8), p.907-914

2003

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A methodology for sequential design of robust decentralized control systems

Automatica (Oxford), 1992-09, Vol.28 (5), p.997-1001

1992

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Gap Metric Concept and Implications for Multilinear Model-Based Controller Design

Industrial & engineering chemistry research, 2003-05, Vol.42 (10), p.2189-2197

2003

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Dynamic Modeling and Analysis of the Cross-Talk between Insulin/AKT and MAPK/ERK Signaling Pathways

Detection of biological switches using the method of Gröebner bases

Dynamics and control of the ERK signaling pathway: Sensitivity, bistability, and oscillations

Regulatory networks and complex interactions between the insulin and angiotensin II signalling systems: models and implications for hypertension and diabetes

Combining optimal control theory and molecular dynamics for protein folding

Plant-wide hierarchical optimization and control of an industrial hydrocracking process

Prediction of optimal folding routes of proteins that satisfy the principle of lowest entropy loss: dynamic contact maps and optimal control

Water and thermal management in PEM fuel cells using feasible humidity plots and model predictive controllers

Computers and chemical engineering virtual special issue in honor of Professor George Stephanopoulos

Economic Model Predictive Control of an Industrial Fluid Catalytic Cracker

Quasi-Min-Max MPC algorithms for LPV systems

Plant-wide optimization and control of an industrial diesel hydro-processing plant

A dynamic non-isothermal model for a hydrocracking reactor: Model development by the method of continuous lumping and application to an industrial unit

Dynamic modeling and optimization of an industrial fluid catalytic cracker

Real-Time Application of Scheduling Quasi-Min−Max Model Predictive Control to a Bench-Scale Neutralization Reactor

ADCHEM 2009 Special Issue

Modeling and Analysis of the Cross-talk Regulators Between the AKT and ERK Signaling Pathways

Dynamic modeling of an industrial diesel hydroprocessing plant by the method of continuous lumping

Optimization of Operations in Supply Chain Systems Using Hybrid Systems Approach and Model Predictive Control

Modeling of an Industrial Delayed Coker Unit

Feedforward and feedback linearization of nonlinear system and its implementation using internal model control (IMC)

Determination of pair-wise inter-residue interaction forces from folding pathways and their implementation in coarse-grained folding prediction

A new approach to defining a dynamic relative gain

A methodology for sequential design of robust decentralized control systems

Gap Metric Concept and Implications for Multilinear Model-Based Controller Design

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