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Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

Bioinformatics, 2011-06, Vol.27 (11), p.1571-1572

2011

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SNPsplit: Allele-specific splitting of alignments between genomes with known SNP genotypes [version 2; peer review: 3 approved]

F1000 research, 2016, Vol.5, p.1479-1479

2016

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Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

Nature genetics, 2011-08, Vol.43 (8), p.811-814

2011

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Large scale loss of data in low-diversity illumina sequencing libraries can be recovered by deferred cluster calling

PloS one, 2011-01, Vol.6 (1), p.e16607-e16607

2011

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Transcription and chromatin determinants of de novo DNA methylation timing in oocytes

Epigenetics & chromatin, 2017-05, Vol.10 (1), p.25-19, Article 25

2017

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Two Mutually Exclusive Local Chromatin States Drive Efficient V(D)J Recombination

Cell reports (Cambridge), 2016-06, Vol.15 (11), p.2475-2487

2016

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Gender Differences in Global but Not Targeted Demethylation in iPSC Reprogramming

Cell reports (Cambridge), 2017-01, Vol.18 (5), p.1079-1089

2017

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DNA methylome analysis using short bisulfite sequencing data

Nature methods, 2012-02, Vol.9 (2), p.145-151

2012

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Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

Nature methods, 2014-08, Vol.11 (8), p.817-820

2014

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SNPsplit: Allele-specific splitting of alignments between genomes with known SNP genotypes

F1000 research, 2016, Vol.5, p.1479

2016

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P-Rex2 regulates Purkinje cell dendrite morphology and motor coordination

Proceedings of the National Academy of Sciences - PNAS, 2008-03, Vol.105 (11), p.4483-4488

2008

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P‐Rex2, a new guanine‐nucleotide exchange factor for Rac

FEBS letters, 2004-08, Vol.572 (1-3), p.172-176

2004

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The RNA-binding protein HuR is essential for the B cell antibody response

Nature immunology, 2015-04, Vol.16 (4), p.415-425

2015

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The receptor protein tyrosine phosphatase PTPRK promotes intestinal repair and catalysis-independent tumour suppression

Journal of cell science, 2024-07, Vol.137 (14)

2024

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Mutual antagonism between IP3RII and miRNA-133a regulates calcium signals and cardiac hypertrophy

The Journal of cell biology, 2012-11, Vol.199 (5), p.783-798

2012

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Ageing is associated with molecular signatures of inflammation and type 2 diabetes in rat pancreatic islets

Diabetologia, 2016-03, Vol.59 (3), p.502-511

2016

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P-Rex1, a PtdIns(3,4,5)P3- and Gβγ-Regulated Guanine-Nucleotide Exchange Factor for Rac

Cell, 2002-03, Vol.108 (6), p.809-821

2002

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RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition

Science advances, 2022-07, Vol.8 (28), p.eabn1382-eabn1382

2022

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P-Rex1 Regulates Neutrophil Function

Current biology, 2005-10, Vol.15 (20), p.1867-1873

2005

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Regulation of P-Rex1 by Phosphatidylinositol (3,4,5)-Trisphosphate and Gβγ Subunits

The Journal of biological chemistry, 2005-02, Vol.280 (6), p.4166-4173

2005

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CD8 locus nuclear dynamics during thymocyte development

The Journal of immunology (1950), 2010-05, Vol.184 (10), p.5686-5695

2010

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CAT 53: A protein phosphatase 1 nuclear targeting subunit encoded in the MHC Class I region strongly expressed in regions of the brain involved in memory, learning, and Alzheimer's disease

Brain research. Molecular brain research., 2005-07, Vol.138 (1), p.70-83

2005

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Influence of the Aglycone Region of the Substrate Binding Cleft of Pseudomonas Xylanase 10A on Catalysis

Biochemistry (Easton), 2001-06, Vol.40 (25), p.7404-7409

2001

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The Use of Forced Protein Evolution to Investigate and Improve Stability of Family 10 Xylanases

The Journal of biological chemistry, 2004-12, Vol.279 (52), p.54369-54379

2004

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ChIPMonk: software for viewing and analysing ChIP-on-chip data

BMC systems biology, 2007-05, Vol.1 (S1), p.P80-P80, Article P80

Andrews, Simon R

2007

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Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

SNPsplit: Allele-specific splitting of alignments between genomes with known SNP genotypes [version 2; peer review: 3 approved]

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

Large scale loss of data in low-diversity illumina sequencing libraries can be recovered by deferred cluster calling

Transcription and chromatin determinants of de novo DNA methylation timing in oocytes

Two Mutually Exclusive Local Chromatin States Drive Efficient V(D)J Recombination

Gender Differences in Global but Not Targeted Demethylation in iPSC Reprogramming

DNA methylome analysis using short bisulfite sequencing data

Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

SNPsplit: Allele-specific splitting of alignments between genomes with known SNP genotypes

P-Rex2 regulates Purkinje cell dendrite morphology and motor coordination

P‐Rex2, a new guanine‐nucleotide exchange factor for Rac

The RNA-binding protein HuR is essential for the B cell antibody response

The receptor protein tyrosine phosphatase PTPRK promotes intestinal repair and catalysis-independent tumour suppression

Mutual antagonism between IP3RII and miRNA-133a regulates calcium signals and cardiac hypertrophy

Ageing is associated with molecular signatures of inflammation and type 2 diabetes in rat pancreatic islets

P-Rex1, a PtdIns(3,4,5)P3- and Gβγ-Regulated Guanine-Nucleotide Exchange Factor for Rac

RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition

P-Rex1 Regulates Neutrophil Function

Regulation of P-Rex1 by Phosphatidylinositol (3,4,5)-Trisphosphate and Gβγ Subunits

CD8 locus nuclear dynamics during thymocyte development

CAT 53: A protein phosphatase 1 nuclear targeting subunit encoded in the MHC Class I region strongly expressed in regions of the brain involved in memory, learning, and Alzheimer's disease

Influence of the Aglycone Region of the Substrate Binding Cleft of Pseudomonas Xylanase 10A on Catalysis

The Use of Forced Protein Evolution to Investigate and Improve Stability of Family 10 Xylanases

ChIPMonk: software for viewing and analysing ChIP-on-chip data

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