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Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data

BMC bioinformatics, 2009-03, Vol.10 (1), p.87-87, Article 87

2009

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High-Resolution Desorption Electrospray Ionization Mass Spectrometry for Chemical Characterization of Organic Aerosols

Analytical chemistry (Washington), 2010-03, Vol.82 (5), p.2048-2058

2010

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DAnTE: a statistical tool for quantitative analysis of -omics data

Bioinformatics, 2008-07, Vol.24 (13), p.1556-1558

2008

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A planar quadrupole device for transmitting and trapping ions in high vacuum

Rapid communications in mass spectrometry, 2023-09, Vol.37 (18), p.e9610-n/a

2023

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Identification of Protein-Protein Interactions and Topologies in Living Cells with Chemical Cross-linking and Mass Spectrometry

Molecular & cellular proteomics, 2009-03, Vol.8 (3), p.409-420

2009

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LIQUID CHROMATOGRAPHY MASS SPECTROMETRY-BASED PROTEOMICS: BIOLOGICAL AND TECHNOLOGICAL ASPECTS

The annals of applied statistics, 2010-12, Vol.4 (4), p.1797-1823

2010

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Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition

Bioinformatics, 2009-10, Vol.25 (19), p.2573-2580

2009

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High-Sensitivity Ion Mobility Spectrometry/Mass Spectrometry Using Electrodynamic Ion Funnel Interfaces

Analytical chemistry (Washington), 2005-05, Vol.77 (10), p.3330-3339

2005

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Uterine Deletion of Trp53 Compromises Antioxidant Responses in the Mouse Decidua

Endocrinology (Philadelphia), 2012-09, Vol.153 (9), p.4568-4579

2012

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Design and Performance of a Dual-Polarity Instrument for Ion Soft Landing

Analytical chemistry (Washington), 2019-05, Vol.91 (9), p.5904-5912

2019

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Ultrasensitive Proteomics Using High-Efficiency On-Line Micro-SPE-NanoLC-NanoESI MS and MS/MS

Analytical chemistry (Washington), 2004-01, Vol.76 (1), p.144-154

2004

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DtaRefinery, a Software Tool for Elimination of Systematic Errors from Parent Ion Mass Measurements in Tandem Mass Spectra Data Sets

Molecular & cellular proteomics, 2010-03, Vol.9 (3), p.486-496

2010

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Increasing Isolation Efficiency Using a Segmented Quadrupole Mass Filter Operated with Rectangular Waveforms

Journal of the American Society for Mass Spectrometry, 2024-06, Vol.35 (6), p.1237-1244

2024

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MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis

BMC bioinformatics, 2013-02, Vol.14 (1), p.49-49, Article 49

2013

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Serpentine Ultralong Path with Extended Routing (SUPER) High Resolution Traveling Wave Ion Mobility-MS using Structures for Lossless Ion Manipulations

Analytical chemistry (Washington), 2017-04, Vol.89 (8), p.4628-4634

2017

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Accelerating prototyping experiments for traveling wave structures for lossless ion manipulations

Talanta (Oxford), 2022-07, Vol.244, p.123446-123446, Article 123446

2022

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High-Throughput Comparative Proteome Analysis Using a Quantitative Cysteinyl-peptide Enrichment Technology

Analytical chemistry (Washington), 2004-09, Vol.76 (18), p.5345-5353

2004

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Ultra-High-Resolution Ion Mobility Separations Over Extended Path Lengths and Mobility Ranges Achieved using a Multilevel Structures for Lossless Ion Manipulations Module

Analytical chemistry (Washington), 2020-06, Vol.92 (11), p.7972-7979

2020

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Direct Mass Spectrometric Analysis of Intact Proteins of the Yeast Large Ribosomal Subunit Using Capillary LC/FTICR

Proceedings of the National Academy of Sciences - PNAS, 2002-04, Vol.99 (9), p.5942-5947

2002

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Ultra-High Resolution Ion Mobility Separations Utilizing Traveling Waves in a 13 m Serpentine Path Length Structures for Lossless Ion Manipulations Module

Analytical chemistry (Washington), 2016-09, Vol.88 (18), p.8957-8964

2016

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Parallel Detection of Fundamental and Sixth Harmonic Signals Using an ICR Cell with Dipole and Sixth Harmonic Detectors

Journal of the American Society for Mass Spectrometry, 2020-03, Vol.31 (3), p.719-726

2020

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STEPS: A grid search methodology for optimized peptide identification filtering of MS/MS database search results

Proteomics (Weinheim), 2013-03, Vol.13 (5), p.766-770

2013

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In Vivo Identification of the Outer Membrane Protein OmcA−MtrC Interaction Network in Shewanella oneidensis MR-1 Cells Using Novel Hydrophobic Chemical Cross-Linkers

Journal of proteome research, 2008-04, Vol.7 (4), p.1712-1720

2008

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Optimization of a Digital Mass Filter for the Isolation of Intact Protein Complexes in Stability Zone 1,1

Analytical chemistry (Washington), 2023-02, Vol.95 (5), p.3062-3068

2023

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Machine learning based prediction for peptide drift times in ion mobility spectrometry

Bioinformatics, 2010-07, Vol.26 (13), p.1601-1607

2010

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Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data

High-Resolution Desorption Electrospray Ionization Mass Spectrometry for Chemical Characterization of Organic Aerosols

DAnTE: a statistical tool for quantitative analysis of -omics data

A planar quadrupole device for transmitting and trapping ions in high vacuum

Identification of Protein-Protein Interactions and Topologies in Living Cells with Chemical Cross-linking and Mass Spectrometry

LIQUID CHROMATOGRAPHY MASS SPECTROMETRY-BASED PROTEOMICS: BIOLOGICAL AND TECHNOLOGICAL ASPECTS

Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition

High-Sensitivity Ion Mobility Spectrometry/Mass Spectrometry Using Electrodynamic Ion Funnel Interfaces

Uterine Deletion of Trp53 Compromises Antioxidant Responses in the Mouse Decidua

Design and Performance of a Dual-Polarity Instrument for Ion Soft Landing

Ultrasensitive Proteomics Using High-Efficiency On-Line Micro-SPE-NanoLC-NanoESI MS and MS/MS

DtaRefinery, a Software Tool for Elimination of Systematic Errors from Parent Ion Mass Measurements in Tandem Mass Spectra Data Sets

Increasing Isolation Efficiency Using a Segmented Quadrupole Mass Filter Operated with Rectangular Waveforms

MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis

Serpentine Ultralong Path with Extended Routing (SUPER) High Resolution Traveling Wave Ion Mobility-MS using Structures for Lossless Ion Manipulations

Accelerating prototyping experiments for traveling wave structures for lossless ion manipulations

High-Throughput Comparative Proteome Analysis Using a Quantitative Cysteinyl-peptide Enrichment Technology

Ultra-High-Resolution Ion Mobility Separations Over Extended Path Lengths and Mobility Ranges Achieved using a Multilevel Structures for Lossless Ion Manipulations Module

Direct Mass Spectrometric Analysis of Intact Proteins of the Yeast Large Ribosomal Subunit Using Capillary LC/FTICR

Ultra-High Resolution Ion Mobility Separations Utilizing Traveling Waves in a 13 m Serpentine Path Length Structures for Lossless Ion Manipulations Module

Parallel Detection of Fundamental and Sixth Harmonic Signals Using an ICR Cell with Dipole and Sixth Harmonic Detectors

STEPS: A grid search methodology for optimized peptide identification filtering of MS/MS database search results

In Vivo Identification of the Outer Membrane Protein OmcA−MtrC Interaction Network in Shewanella oneidensis MR-1 Cells Using Novel Hydrophobic Chemical Cross-Linkers

Optimization of a Digital Mass Filter for the Isolation of Intact Protein Complexes in Stability Zone 1,1

Machine learning based prediction for peptide drift times in ion mobility spectrometry

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