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The impact of Polycomb group (PcG) and Trithorax group (TrxG) epigenetic factors in plant plasticity

The New phytologist, 2015-11, Vol.208 (3), p.684-694

2015

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MADS-box genes underground becoming mainstream: plant root developmental mechanisms

The New phytologist, 2019-08, Vol.223 (3), p.1143-1158

2019

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Critical dynamics in genetic regulatory networks: examples from four kingdoms

PloS one, 2008-06, Vol.3 (6), p.e2456-e2456

2008

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Hormone symphony during root growth and development

Developmental dynamics, 2012-12, Vol.241 (12), p.1867-1885

2012

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Floral morphogenesis: stochastic explorations of a gene network epigenetic landscape

PloS one, 2008-11, Vol.3 (11), p.e3626-e3626

2008

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Cell patterns emerge from coupled chemical and physical fields with cell proliferation dynamics: the Arabidopsis thaliana root as a study system

PLoS computational biology, 2013-05, Vol.9 (5), p.e1003026-e1003026

2013

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Role of transcriptional regulation in the evolution of plant phenotype: A dynamic systems approach

Developmental dynamics, 2015-09, Vol.244 (9), p.1074-1095

2015

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Environmental and social factors account for Mexican maize richness and distribution: A data mining approach

Agriculture, ecosystems & environment, 2013-10, Vol.179, p.25-34

2013

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A Minimal Regulatory Network of Extrinsic and Intrinsic Factors Recovers Observed Patterns of CD4+ T Cell Differentiation and Plasticity

PLoS computational biology, 2015-06, Vol.11 (6), p.e1004324-e1004324

2015

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AGAMOUS-LIKE 17, a novel flowering promoter, acts in a FT-independent photoperiod pathway

The Plant journal : for cell and molecular biology, 2008-07, Vol.55 (2), p.253-265

2008

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ULTRAPETALAs in action: Unraveling their role in root development

Plant science (Limerick), 2024-03, Vol.340, p.111975-111975, Article 111975

2024

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Role of Cytokine Combinations on CD4+ T Cell Differentiation, Partial Polarization, and Plasticity: Continuous Network Modeling Approach

Frontiers in physiology, 2018-08, Vol.9, p.877-877

2018

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Hybrid lineages of CD4 + T cells: a handbook update

Frontiers in immunology, 2024, Vol.15, p.1344078-1344078

2024

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When ABC becomes ACB

Journal of experimental botany, 2012-04, Vol.63 (7), p.2377-2395

2012

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Genome mining of Streptomyces scabrisporus NF3 reveals symbiotic features including genes related to plant interactions

PloS one, 2018-02, Vol.13 (2), p.e0192618-e0192618

2018

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General theory of genotype to phenotype mapping: derivation of epigenetic landscapes from N-node complex gene regulatory networks

Physical review letters, 2012-09, Vol.109 (11), p.118102-118102, Article 118102

2012

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Molecular evolution and patterns of duplication in the SEP/AGL6-like lineage of the Zingiberales: a proposed mechanism for floral diversification

Molecular biology and evolution, 2013-11, Vol.30 (11), p.2401-2422

2013

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The Arabidopsis thaliana flower organ specification gene regulatory network determines a robust differentiation process

Journal of theoretical biology, 2010-06, Vol.264 (3), p.971-983

2010

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Reshaping the epigenetic landscape during early flower development: induction of attractor transitions by relative differences in gene decay rates

BMC systems biology, 2015-05, Vol.9 (1), p.20-20, Article 20

2015

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efficient flat-surface collar-free grafting method for Arabidopsis thaliana seedlings

Plant methods, 2013-05, Vol.9 (1), p.14-14, Article 14

2013

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ARACNe-based inference, using curated microarray data, of Arabidopsis thaliana root transcriptional regulatory networks

BMC plant biology, 2014-04, Vol.14 (1), p.97-97, Article 97

2014

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MADS-Box Genes Are Key Components of Genetic Regulatory Networks Involved in Abiotic Stress and Plastic Developmental Responses in Plants

Frontiers in plant science, 2019-07, Vol.10, p.853-853

2019

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"Antelope": a hybrid-logic model checker for branching-time Boolean GRN analysis

BMC bioinformatics, 2011-12, Vol.12 (1), p.490-490, Article 490

2011

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ULTRAPETALA1 maintains Arabidopsis root stem cell niche independently of ARABIDOPSIS TRITHORAX1

The New phytologist, 2020-02, Vol.225 (3), p.1261-1272

2020

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The impact of Polycomb group (PcG) and Trithorax group (TrxG) epigenetic factors in plant plasticity

MADS-box genes underground becoming mainstream: plant root developmental mechanisms

Critical dynamics in genetic regulatory networks: examples from four kingdoms

Hormone symphony during root growth and development

Floral morphogenesis: stochastic explorations of a gene network epigenetic landscape

Cell patterns emerge from coupled chemical and physical fields with cell proliferation dynamics: the Arabidopsis thaliana root as a study system

Role of transcriptional regulation in the evolution of plant phenotype: A dynamic systems approach

Environmental and social factors account for Mexican maize richness and distribution: A data mining approach

A Minimal Regulatory Network of Extrinsic and Intrinsic Factors Recovers Observed Patterns of CD4+ T Cell Differentiation and Plasticity

AGAMOUS-LIKE 17, a novel flowering promoter, acts in a FT-independent photoperiod pathway

ULTRAPETALAs in action: Unraveling their role in root development

Role of Cytokine Combinations on CD4+ T Cell Differentiation, Partial Polarization, and Plasticity: Continuous Network Modeling Approach

Hybrid lineages of CD4 + T cells: a handbook update

When ABC becomes ACB

Genome mining of Streptomyces scabrisporus NF3 reveals symbiotic features including genes related to plant interactions

General theory of genotype to phenotype mapping: derivation of epigenetic landscapes from N-node complex gene regulatory networks

Phylotranscriptomic Analyses of Mycoheterotrophic Monocots Show a Continuum of Convergent Evolutionary Changes in Expressed Nuclear Genes From Three Independent Nonphotosynthetic Lineages

Molecular evolution and patterns of duplication in the SEP/AGL6-like lineage of the Zingiberales: a proposed mechanism for floral diversification

The Arabidopsis thaliana flower organ specification gene regulatory network determines a robust differentiation process

Reshaping the epigenetic landscape during early flower development: induction of attractor transitions by relative differences in gene decay rates

efficient flat-surface collar-free grafting method for Arabidopsis thaliana seedlings

ARACNe-based inference, using curated microarray data, of Arabidopsis thaliana root transcriptional regulatory networks

MADS-Box Genes Are Key Components of Genetic Regulatory Networks Involved in Abiotic Stress and Plastic Developmental Responses in Plants

"Antelope": a hybrid-logic model checker for branching-time Boolean GRN analysis

ULTRAPETALA1 maintains Arabidopsis root stem cell niche independently of ARABIDOPSIS TRITHORAX1

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