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Quantitative structural mechanobiology of platelet-driven blood clot contraction

Nature communications, 2017-11, Vol.8 (1), p.1274-10, Article 1274

2017

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Structural basis for the nonlinear mechanics of fibrin networks under compression

Biomaterials, 2014-08, Vol.35 (25), p.6739-6749

2014

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Interactions between Tau and Different Conformations of Tubulin: Implications for Tau Function and Mechanism

Journal of molecular biology, 2017-05, Vol.429 (9), p.1424-1438

2017

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Periodic reversal of direction allows Myxobacteria to swarm

Proceedings of the National Academy of Sciences - PNAS, 2009-01, Vol.106 (4), p.1222-1227

2009

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Type IV pili interactions promote intercellular association and moderate swarming of Pseudomonas aeruginosa

Proceedings of the National Academy of Sciences - PNAS, 2014-12, Vol.111 (50), p.18013-18018

2014

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Bare bones pattern formation: a core regulatory network in varying geometries reproduces major features of vertebrate limb development and evolution

PloS one, 2010-05, Vol.5 (5), p.e10892-e10892

2010

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Mechanism for the catastrophe-promoting activity of the microtubule destabilizer Op18/stathmin

Proceedings of the National Academy of Sciences - PNAS, 2013-12, Vol.110 (51), p.20449-20454

2013

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The mechanisms of microtubule catastrophe and rescue: implications from analysis of a dimer-scale computational model

Molecular biology of the cell, 2012-02, Vol.23 (4), p.642-656

2012

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Fibrin networks regulate protein transport during thrombus development

PLoS computational biology, 2013-06, Vol.9 (6), p.e1003095-e1003095

2013

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Patterns of mesenchymal condensation in a multiscale, discrete stochastic model

PLoS computational biology, 2007-04, Vol.3 (4), p.e76-e76

2007

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A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis

Computer physics communications, 2007-06, Vol.176 (11), p.670-681

2007

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Two-photon intravital imaging of thrombus development

Journal of Biomedical Optics, 2010-01, Vol.15 (1), p.016020-016020

2010

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Multicomponent model of deformation and detachment of a biofilm under fluid flow

Journal of the Royal Society interface, 2015-05, Vol.12 (106)

2015

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A Hybrid Approach for Segmentation and Tracking of Myxococcus Xanthus Swarms

IEEE transactions on medical imaging, 2016-09, Vol.35 (9), p.2074-2084

2016

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IEEE_Xplore

Strong Binding of Platelet Integrin αIIbβ3 to Fibrin Clots: Potential Target to Destabilize Thrombi

Scientific reports, 2017-10, Vol.7 (1), p.13001-8, Article 13001

2017

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Fatal dysfunction and disintegration of thrombin-stimulated platelets

Haematologica (Roma), 2019-09, Vol.104 (9), p.1866-1878

2019

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Algebraic geometrical solutions for certain evolution equations and Hamiltonian flows on nonlinear subvarieties of generalized Jacobians

Inverse problems, 2001-08, Vol.17 (4), p.1017-1042

2001

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Microtubule dynamic instability: the role of cracks between protofilaments

Soft matter, 2014-03, Vol.10 (12), p.2069-2080

2014

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Foam-like compression behavior of fibrin networks

Biomechanics and modeling in mechanobiology, 2016-02, Vol.15 (1), p.213-228

2016

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A framework for deriving analytic steady states of biochemical reaction networks

PLoS computational biology, 2023-04, Vol.19 (4), p.e1011039-e1011039

2023

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From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development

Computing in science & engineering, 2007-07, Vol.9 (4), p.50-60

2007

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IEEE_Xplore

A model for the intrinsic limit of cancer therapy: Duality of treatment-induced cell death and treatment-induced stemness

PLoS computational biology, 2022-07, Vol.18 (7), p.e1010319-e1010319

2022

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Deep reinforcement learning for optimal experimental design in biology

PLoS computational biology, 2022-11, Vol.18 (11), p.e1010695-e1010695

2022

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Computational optogenetics: empirically-derived voltage- and light-sensitive channelrhodopsin-2 model

PLoS computational biology, 2013-09, Vol.9 (9), p.e1003220-e1003220

2013

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Likelihood-ratio test statistic for the finite-sample case in nonlinear ordinary differential equation models

PLoS computational biology, 2023-09, Vol.19 (9), p.e1011417-e1011417

2023

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Quantitative structural mechanobiology of platelet-driven blood clot contraction

Structural basis for the nonlinear mechanics of fibrin networks under compression

Interactions between Tau and Different Conformations of Tubulin: Implications for Tau Function and Mechanism

Periodic reversal of direction allows Myxobacteria to swarm

Type IV pili interactions promote intercellular association and moderate swarming of Pseudomonas aeruginosa

Bare bones pattern formation: a core regulatory network in varying geometries reproduces major features of vertebrate limb development and evolution

Mechanism for the catastrophe-promoting activity of the microtubule destabilizer Op18/stathmin

The mechanisms of microtubule catastrophe and rescue: implications from analysis of a dimer-scale computational model

Fibrin networks regulate protein transport during thrombus development

Patterns of mesenchymal condensation in a multiscale, discrete stochastic model

A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis

Two-photon intravital imaging of thrombus development

Multicomponent model of deformation and detachment of a biofilm under fluid flow

A Hybrid Approach for Segmentation and Tracking of Myxococcus Xanthus Swarms

Strong Binding of Platelet Integrin αIIbβ3 to Fibrin Clots: Potential Target to Destabilize Thrombi

Fatal dysfunction and disintegration of thrombin-stimulated platelets

Algebraic geometrical solutions for certain evolution equations and Hamiltonian flows on nonlinear subvarieties of generalized Jacobians

Microtubule dynamic instability: the role of cracks between protofilaments

Foam-like compression behavior of fibrin networks

A framework for deriving analytic steady states of biochemical reaction networks

From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development

A model for the intrinsic limit of cancer therapy: Duality of treatment-induced cell death and treatment-induced stemness

Deep reinforcement learning for optimal experimental design in biology

Computational optogenetics: empirically-derived voltage- and light-sensitive channelrhodopsin-2 model

Likelihood-ratio test statistic for the finite-sample case in nonlinear ordinary differential equation models

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