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catRAPID omics: a web server for large-scale prediction of protein-RNA interactions

Bioinformatics (Oxford, England), 2013-11, Vol.29 (22), p.2928-2930

2013

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GPSeq reveals the radial organization of chromatin in the cell nucleus

Nature biotechnology, 2020-10, Vol.38 (10), p.1184-1193

2020

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Intergenic RNA mainly derives from nascent transcripts of known genes

Genome Biology, 2021-05, Vol.22 (1), p.136-136, Article 136

2021

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iFISH is a publically available resource enabling versatile DNA FISH to study genome architecture

Nature communications, 2019-04, Vol.10 (1), p.1636-1636, Article 1636

2019

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RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions

Nature communications, 2020-02, Vol.11 (1), p.1018-1018, Article 1018

2020

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Heteromeric RNP Assembly at LINEs Controls Lineage-Specific RNA Processing

Cell, 2018-08, Vol.174 (5), p.1067-1081.e17

2018

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Recombination of repeat elements generates somatic complexity in human genomes

Cell, 2022-08, Vol.185 (16), p.3025-3040.e6

2022

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Somatic Copy Number Alterations in Human Cancers: An Analysis of Publicly Available Data From The Cancer Genome Atlas

Frontiers in oncology, 2021-07, Vol.11, p.700568

2021

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ccSOL omics: a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli

Bioinformatics (Oxford, England), 2014-10, Vol.30 (20), p.2975-2977

2014

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Neurodegenerative diseases: quantitative predictions of protein-RNA interactions

RNA (Cambridge), 2013-02, Vol.19 (2), p.129-140

2013

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DnaK Functions as a Central Hub in the E. coli Chaperone Network

Cell reports (Cambridge), 2012-03, Vol.1 (3), p.251-264

2012

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X-inactivation: quantitative predictions of protein interactions in the Xist network

Nucleic acids research, 2013-01, Vol.41 (1), p.e31-e31

2013

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Genome-wide detection of DNA double-strand breaks by in-suspension BLISS

Nature protocols, 2020-12, Vol.15 (12), p.3894-3941

2020

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Acoustic emission onset time detection for structural monitoring with U-Net neural network architecture

Developments in the built environment, 2024-04, Vol.18, p.100449, Article 100449

2024

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BLVector: Fast BLAST-Like Algorithm for Manycore CPU With Vectorization

Frontiers in genetics, 2021-02, Vol.12, p.618659-618659

2021

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Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein

Nucleic acids research, 2013-12, Vol.41 (22), p.9987-9998

2013

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SeAMotE: a method for high-throughput motif discovery in nucleic acid sequences

BMC genomics, 2014-10, Vol.15 (1), p.925-925, Article 925

2014

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Author Correction: RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions

Nature communications, 2021-05, Vol.12 (1), p.3128-3128, Article 3128

2021

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An atlas of endogenous DNA double-strand breaks arising during human neural cell fate determination

Scientific data, 2022-07, Vol.9 (1), p.400-19, Article 400

2022

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Comparative Genomics, Evolution, and Drought-Induced Expression of Dehydrin Genes in Model Brachypodium Grasses

Plants (Basel), 2021-12, Vol.10 (12), p.2664

2021

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Disulfide Bonds Reduce the Toxicity of the Amyloid Fibrils Formed by an Extracellular Protein

Angewandte Chemie International Edition, 2011-07, Vol.50 (31), p.7048-7051

International ed. in English, 2011

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Predicting protein associations with long noncoding RNAs

Nature methods, 2011-06, Vol.8 (6), p.444-445

2011

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Sequence-Based Prediction of Protein Solubility

Journal of molecular biology, 2012-08, Vol.421 (2-3), p.237-241

2012

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No way out: when RNA elements promote nuclear retention

The EMBO journal, 2018-03, Vol.37 (6), p.n/a

2018

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catRAPID omics: a web server for large-scale prediction of protein-RNA interactions

GPSeq reveals the radial organization of chromatin in the cell nucleus

Intergenic RNA mainly derives from nascent transcripts of known genes

iFISH is a publically available resource enabling versatile DNA FISH to study genome architecture

RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions

Heteromeric RNP Assembly at LINEs Controls Lineage-Specific RNA Processing

Recombination of repeat elements generates somatic complexity in human genomes

Somatic Copy Number Alterations in Human Cancers: An Analysis of Publicly Available Data From The Cancer Genome Atlas

ccSOL omics: a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli

Neurodegenerative diseases: quantitative predictions of protein-RNA interactions

DnaK Functions as a Central Hub in the E. coli Chaperone Network

X-inactivation: quantitative predictions of protein interactions in the Xist network

Genome-wide detection of DNA double-strand breaks by in-suspension BLISS

Acoustic emission onset time detection for structural monitoring with U-Net neural network architecture

BLVector: Fast BLAST-Like Algorithm for Manycore CPU With Vectorization

Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein

SeAMotE: a method for high-throughput motif discovery in nucleic acid sequences

Author Correction: RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions

An atlas of endogenous DNA double-strand breaks arising during human neural cell fate determination

Comparative Genomics, Evolution, and Drought-Induced Expression of Dehydrin Genes in Model Brachypodium Grasses

Disulfide Bonds Reduce the Toxicity of the Amyloid Fibrils Formed by an Extracellular Protein

Deficiency of the Heterogeneous Nuclear Ribonucleoprotein U locus leads to delayed hindbrain neurogenesis

Predicting protein associations with long noncoding RNAs

Sequence-Based Prediction of Protein Solubility

No way out: when RNA elements promote nuclear retention

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