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Unexpected implications of STAT3 acetylation revealed by genetic encoding of acetyl-lysine

Biochimica et biophysica acta. General subjects, 2019-09, Vol.1863 (9), p.1343-1350

2019

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Protein−DNA binding in the absence of specific base-pair recognition

Proceedings of the National Academy of Sciences - PNAS, 2014-12, Vol.111 (48), p.17140-17145

2014

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Control of transcriptional pausing by biased thermal fluctuations on repetitive genomic sequences

Proceedings of the National Academy of Sciences - PNAS, 2016-11, Vol.113 (47), p.E7409-E7417

2016

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Genome-Wide Organization of Eukaryotic Preinitiation Complex Is Influenced by Nonconsensus Protein-DNA Binding

Biophysical journal, 2013-03, Vol.104 (5), p.1107-1115

2013

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Nonspecific Protein-DNA Binding Is Widespread in the Yeast Genome

Biophysical journal, 2012-04, Vol.102 (8), p.1881-1888

2012

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Positive and Negative Design for Nonconsensus Protein-DNA Binding Affinity in the Vicinity of Functional Binding Sites

Biophysical journal, 2013-10, Vol.105 (7), p.1653-1660

2013

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Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes

PLoS computational biology, 2015-08, Vol.11 (8), p.e1004429-e1004429

2015

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Control of Transcription Initiation by Biased Thermal Fluctuations on Repetitive Genomic Sequences

Biomolecules (Basel, Switzerland), 2020-09, Vol.10 (9), p.1299

2020

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Nonspecific Transcription-Factor-DNA Binding Influences Nucleosome Occupancy in Yeast

Biophysical journal, 2011-11, Vol.101 (10), p.2465-2475

2011

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Widespread Increase in Transcription Factor-DNA Binding due to Mismatch Damage

Biophysical journal, 2018-02, Vol.114 (3), p.440a-441a

2018

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DNA Sequence Context Controls the Binding and Processivity of the T7 DNA Primase

iScience, 2018-04, Vol.2, p.141-147

2018

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Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis

Angewandte Chemie (International ed.), 2023-11, Vol.62 (47), p.e202310913-e202310913

International ed. in English, 2023

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Cover Picture: Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis (Angew. Chem. Int. Ed. 47/2023)

Angewandte Chemie International Edition, 2023-11, Vol.62 (47)

International ed. in English, 2023

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QBiC-Pred: quantitative predictions of transcription factor binding changes due to sequence variants

Nucleic acids research, 2019-07, Vol.47 (W1), p.W127

2019

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DNA mismatches reveal conformational penalties in protein-DNA recognition

Nature (London), 2020-11, Vol.587 (7833), p.291-296

2020

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Inferring primase-DNA specific recognition using a data driven approach

Nucleic acids research, 2021-11, Vol.49 (20), p.11447

2021

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Genome-Wide Organization of Eukaryotic Pre-Initiation Complex is Influenced by Non-Consensus Protein-DNA Binding

Biophysical journal, 2014-01, Vol.106 (2), p.497a-498a

2014

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Short tandem repeats bind transcription factors to tune eukaryotic gene expression

Science (American Association for the Advancement of Science), 2023-09, Vol.381 (6664), p.eadd1250-eadd1250

2023

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UV irradiation remodels the specificity landscape of transcription factors

Proceedings of the National Academy of Sciences - PNAS, 2023-03, Vol.120 (11), p.e2217422120-e2217422120

2023

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Short tandem repeats recruit transcription factors to tune eukaryotic gene expression

Biophysical journal, 2022-02, Vol.121 (3), p.287a-288a

2022

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Protein-DNA Binding in the Absence of Consensus Binding Motif

Biophysical journal, 2015-01, Vol.108 (2), p.205a-205a

2015

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Titelbild: Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis (Angew. Chem. 47/2023)

Angewandte Chemie, 2023-11, Vol.135 (47)

2023

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Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis

Angewandte Chemie, 2023-11, Vol.135 (47)

2023

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Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes: e1004429

PLoS computational biology, 2015-08, Vol.11 (8)

2015

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Multi-Scale Sequence Correlations Increase Proteome Structural Disorder and Promiscuity

Journal of molecular biology, 2011-06, Vol.409 (3), p.439-449

2011

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Unexpected implications of STAT3 acetylation revealed by genetic encoding of acetyl-lysine

Protein−DNA binding in the absence of specific base-pair recognition

Control of transcriptional pausing by biased thermal fluctuations on repetitive genomic sequences

Genome-Wide Organization of Eukaryotic Preinitiation Complex Is Influenced by Nonconsensus Protein-DNA Binding

Nonspecific Protein-DNA Binding Is Widespread in the Yeast Genome

Positive and Negative Design for Nonconsensus Protein-DNA Binding Affinity in the Vicinity of Functional Binding Sites

Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes

Control of Transcription Initiation by Biased Thermal Fluctuations on Repetitive Genomic Sequences

Nonspecific Transcription-Factor-DNA Binding Influences Nucleosome Occupancy in Yeast

Widespread Increase in Transcription Factor-DNA Binding due to Mismatch Damage

DNA Sequence Context Controls the Binding and Processivity of the T7 DNA Primase

Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis

Cover Picture: Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis (Angew. Chem. Int. Ed. 47/2023)

QBiC-Pred: quantitative predictions of transcription factor binding changes due to sequence variants

DNA mismatches reveal conformational penalties in protein-DNA recognition

Inferring primase-DNA specific recognition using a data driven approach

Genome-Wide Organization of Eukaryotic Pre-Initiation Complex is Influenced by Non-Consensus Protein-DNA Binding

Short tandem repeats bind transcription factors to tune eukaryotic gene expression

UV irradiation remodels the specificity landscape of transcription factors

Short tandem repeats recruit transcription factors to tune eukaryotic gene expression

Protein-DNA Binding in the Absence of Consensus Binding Motif

Titelbild: Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis (Angew. Chem. 47/2023)

Deciphering the Role of the Ser‐Phosphorylation Pattern on the DNA‐Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis

Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes: e1004429

Multi-Scale Sequence Correlations Increase Proteome Structural Disorder and Promiscuity

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