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Visualization and analytics tools for infectious disease epidemiology: A systematic review

Journal of biomedical informatics, 2014-10, Vol.51, p.287-298

2014

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Large benefits to youth-focused HIV treatment-as-prevention efforts in generalized heterosexual populations: An agent-based simulation model

PLoS computational biology, 2019-12, Vol.15 (12), p.e1007561-e1007561

2019

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Comparison of electronic data capture (EDC) with the standard data capture method for clinical trial data

PloS one, 2011-09, Vol.6 (9), p.e25348-e25348

2011

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Risk compensation after HIV-1 vaccination may accelerate viral adaptation and reduce cost-effectiveness: a modeling study

Scientific reports, 2021-03, Vol.11 (1), p.6798-6798, Article 6798

2021

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Why does age at HIV infection correlate with set point viral load? An evolutionary hypothesis

Epidemics, 2022-12, Vol.41, p.100629-100629, Article 100629

2022

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Technical desiderata for the integration of genomic data into Electronic Health Records

Journal of biomedical informatics, 2012-06, Vol.45 (3), p.419-422

2012

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Test-and-treat coverage and HIV virulence evolution among men who have sex with men

Virus evolution, 2021-01, Vol.7 (1), p.veab011-veab011

2021

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Relational concurrency, stages of infection, and the evolution of HIV set point viral load

Virus evolution, 2018-07, Vol.4 (2), p.vey032-vey032

2018

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Expanding Assessments of Translational Research Programs: Supplementing Metrics With Value Judgments

Evaluation & the health professions, 2014-03, Vol.37 (1), p.83-97

2014

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Timeliness and data element completeness of immunization data in Washington State in 2010: a comparison of data exchange methods

AMIA ... Annual Symposium proceedings, 2012, Vol.2012, p.340-349

2012

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Methods to identify standard data elements in clinical and public health forms

AMIA ... Annual Symposium proceedings, 2011, Vol.2011, p.19-27

2011

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Supervised learning for the automated transcription of spacer classification from spoligotype films

BMC bioinformatics, 2009-08, Vol.10 (1), p.248-248, Article 248

2009

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Evolution of HIV virulence in response to disease-modifying vaccines: A modeling study

Vaccine, 2023-10, Vol.41 (43), p.6461-6469

2023

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Microevolution of the Direct Repeat Locus of Mycobacterium tuberculosis in a Strain Prevalent in San Francisco

Journal of Clinical Microbiology, 2006-04, Vol.44 (4), p.1558-1560

2006

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Usability evaluation of pharmacogenomics clinical decision support aids and clinical knowledge resources in a computerized provider order entry system: A mixed methods approach

International journal of medical informatics (Shannon, Ireland), 2014-07, Vol.83 (7), p.473-483

2014

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Models to predict the public health impact of vaccine resistance: A systematic review

Vaccine, 2019-08, Vol.37 (35), p.4886-4895

2019

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Making pharmacogenomic-based prescribing alerts more effective: A scenario-based pilot study with physicians

Journal of biomedical informatics, 2015-06, Vol.55, p.249-259

2015

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Using random walks to identify cancer-associated modules in expression data

BioData mining, 2013-10, Vol.6 (1), p.17-17, Article 17

2013

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HIV population-level adaptation can rapidly diminish the impact of a partially effective vaccine

Vaccine, 2018-01, Vol.36 (4), p.514-520

2018

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Assessing the Work Practices and Information Needs of Disease Investigators

Online journal of public health informatics, 2015-02, Vol.7 (1)

2015

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Towards a Framework for Data Quality Properties of Indicators used in Surveillance

Online journal of public health informatics, 2015-02, Vol.7 (1)

2015

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Developing the Scalable Data Integration for Disease Surveillance (SDIDS) Platform

Online journal of public health informatics, 2016-03, Vol.8 (1)

2016

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Key Findings and Lessons from an Evaluation of the Rockefeller Foundation's Disease Surveillance Networks Initiative

Emerging health threats journal, 2013, Vol.6 (1), p.19959

2013

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Integrated Disease Surveillance to Reduce Data Fragmentation – An Application to Malaria Control

Online journal of public health informatics, 2015-02, Vol.7 (1)

2015

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A tuberculosis outbreak in a private-home family child care center in San Francisco, 2002 to 2004

Pediatrics (Evanston), 2006-03, Vol.117 (3), p.863

2006

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Visualization and analytics tools for infectious disease epidemiology: A systematic review

Large benefits to youth-focused HIV treatment-as-prevention efforts in generalized heterosexual populations: An agent-based simulation model

Comparison of electronic data capture (EDC) with the standard data capture method for clinical trial data

Risk compensation after HIV-1 vaccination may accelerate viral adaptation and reduce cost-effectiveness: a modeling study

Why does age at HIV infection correlate with set point viral load? An evolutionary hypothesis

Technical desiderata for the integration of genomic data into Electronic Health Records

Test-and-treat coverage and HIV virulence evolution among men who have sex with men

Relational concurrency, stages of infection, and the evolution of HIV set point viral load

Expanding Assessments of Translational Research Programs: Supplementing Metrics With Value Judgments

Timeliness and data element completeness of immunization data in Washington State in 2010: a comparison of data exchange methods

Methods to identify standard data elements in clinical and public health forms

Supervised learning for the automated transcription of spacer classification from spoligotype films

Evolution of HIV virulence in response to disease-modifying vaccines: A modeling study

Microevolution of the Direct Repeat Locus of Mycobacterium tuberculosis in a Strain Prevalent in San Francisco

Usability evaluation of pharmacogenomics clinical decision support aids and clinical knowledge resources in a computerized provider order entry system: A mixed methods approach

Models to predict the public health impact of vaccine resistance: A systematic review

Making pharmacogenomic-based prescribing alerts more effective: A scenario-based pilot study with physicians

Using random walks to identify cancer-associated modules in expression data

HIV population-level adaptation can rapidly diminish the impact of a partially effective vaccine

Assessing the Work Practices and Information Needs of Disease Investigators

Towards a Framework for Data Quality Properties of Indicators used in Surveillance

Developing the Scalable Data Integration for Disease Surveillance (SDIDS) Platform

Key Findings and Lessons from an Evaluation of the Rockefeller Foundation's Disease Surveillance Networks Initiative

Integrated Disease Surveillance to Reduce Data Fragmentation – An Application to Malaria Control

A tuberculosis outbreak in a private-home family child care center in San Francisco, 2002 to 2004

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