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HIV and tuberculosis co-infection among migrants in Europe: A systematic review on the prevalence, incidence and mortality

PloS one, 2017-09, Vol.12 (9), p.e0185526-e0185526

2017

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VIRULIGN: fast codon-correct alignment and annotation of viral genomes

Bioinformatics, 2019-05, Vol.35 (10), p.1763-1765

2019

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Phylogenetic analysis as a forensic tool in HIV transmission investigations

AIDS (London), 2018-03, Vol.32 (5), p.543-554

2018

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Insect-specific viruses in the Parvoviridae family: Genetic lineage characterization and spatiotemporal dynamics of the recently established Brevihamaparvovirus genus

Virus research, 2022-05, Vol.313, p.198728-198728, Article 198728

2022

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Genomic Signature and the Identification of New Sporulation Genes

Journal of Bacteriology, 2013-05, Vol.195 (9), p.2101-2115

2013

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Phylogeography of hepatitis B virus: the role of Portugal in the early dissemination of HBV worldwide

PloS one, 2022-12, Vol.17 (12), p.e0276618-e0276618

2022

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Readdressing the genetic diversity and taxonomy of the Mesoniviridae family, as well as its relationships with other nidoviruses and putative mesonivirus-like viral sequences

Virus research, 2022-05, Vol.313, p.198727-198727, Article 198727

2022

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Trends of Transmitted and Acquired Drug Resistance in Europe From 1981 to 2019: A Comparison Between the Populations of Late Presenters and Non-late Presenters

Frontiers in microbiology, 2022-04, Vol.13, p.846943-846943

2022

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Molecular footprints of selective pressure in the neuraminidase gene of currently circulating human influenza subtypes and lineages

Virology (New York, N.Y.), 2018-09, Vol.522, p.122-130

2018

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Quantifying Differences in the Tempo of Human Immunodeficiency Virus Type 1 Subtype Evolution

Journal of Virology, 2009-12, Vol.83 (24), p.12917-12924

2009

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A Tale of Three Recent Pandemics: Influenza, HIV and SARS-CoV-2

Frontiers in microbiology, 2022-06, Vol.13, p.889643-889643

2022

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Tuberculosis care for migrant patients in Portugal: a mixed methods study with primary healthcare providers

BMC health services research, 2019-04, Vol.19 (1), p.233-233, Article 233

2019

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Zika genomics urgently need standardized and curated reference sequences

PLoS pathogens, 2017-09, Vol.13 (9), p.e1006528-e1006528

2017

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Genetic lineage characterization and spatiotemporal dynamics of classical insect-specific flaviviruses: outcomes and limitations

Virus research, 2021-10, Vol.303, p.198507-198507, Article 198507

2021

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HIV-1 diversity and pre-treatment drug resistance in the era of integrase inhibitor among newly diagnosed ART-naïve adult patients in Luanda, Angola

Scientific reports, 2024-07, Vol.14 (1), p.15893-10, Article 15893

2024

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MARVEL-minimising the emergence and dissemination of HIV-1 drug resistance in Portuguese-speaking African Countries (PALOP): low-cost portable NGS platform for HIV-1 surveillance in Africa

BMC infectious diseases, 2024-08, Vol.24 (1), p.884-8, Article 884

2024

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An Evolutionary Model-Based Approach To Quantify the Genetic Barrier to Drug Resistance in Fast-Evolving Viruses and Its Application to HIV-1 Subtypes and Integrase Inhibitors

Antimicrobial agents and chemotherapy, 2019-08, Vol.63 (8)

2019

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Drivers of HIV-1 transmission: The Portuguese case

PloS one, 2019-09, Vol.14 (9), p.e0218226-e0218226

2019

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Differential patterns of postmigration HIV-1 infection acquisition among Portuguese immigrants of different geographical origins

AIDS (London), 2022-06, Vol.36 (7), p.997-1005

2022

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Applying Next-Generation Sequencing to Track HIV-1 Drug Resistance Mutations Circulating in Portugal

Viruses, 2024-04, Vol.16 (4), p.622

2024

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Short Communication: HIV and Tuberculosis Co-Infection Among Migrants in Portugal: A Brief Study on Their Sociodemographic, Clinical, and Genomic Characteristics

AIDS research and human retroviruses, 2021-01, Vol.37 (1), p.34-37

2021

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Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology

The Journal of infectious diseases, 2019-06, Vol.220 (2), p.233-243

2019

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Adherence to antiretroviral therapy among HIV-1 patients from sub-Saharan Africa: a systematic review

AIDS reviews, 2024, Vol.26 (3), p.102

2024

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The Role of Late Presenters in HIV-1 Transmission Clusters in Europe

Viruses, 2023-12, Vol.15 (12), p.2418

2023

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The impact of HIV-1 within-host evolution on transmission dynamics

Current opinion in virology, 2018-02, Vol.28 (C), p.92-101

2018

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HIV and tuberculosis co-infection among migrants in Europe: A systematic review on the prevalence, incidence and mortality

VIRULIGN: fast codon-correct alignment and annotation of viral genomes

Phylogenetic analysis as a forensic tool in HIV transmission investigations

Insect-specific viruses in the Parvoviridae family: Genetic lineage characterization and spatiotemporal dynamics of the recently established Brevihamaparvovirus genus

Genomic Signature and the Identification of New Sporulation Genes

Phylogeography of hepatitis B virus: the role of Portugal in the early dissemination of HBV worldwide

Readdressing the genetic diversity and taxonomy of the Mesoniviridae family, as well as its relationships with other nidoviruses and putative mesonivirus-like viral sequences

Trends of Transmitted and Acquired Drug Resistance in Europe From 1981 to 2019: A Comparison Between the Populations of Late Presenters and Non-late Presenters

Molecular footprints of selective pressure in the neuraminidase gene of currently circulating human influenza subtypes and lineages

Quantifying Differences in the Tempo of Human Immunodeficiency Virus Type 1 Subtype Evolution

A Tale of Three Recent Pandemics: Influenza, HIV and SARS-CoV-2

Tuberculosis care for migrant patients in Portugal: a mixed methods study with primary healthcare providers

Zika genomics urgently need standardized and curated reference sequences

Genetic lineage characterization and spatiotemporal dynamics of classical insect-specific flaviviruses: outcomes and limitations

HIV-1 diversity and pre-treatment drug resistance in the era of integrase inhibitor among newly diagnosed ART-naïve adult patients in Luanda, Angola

MARVEL-minimising the emergence and dissemination of HIV-1 drug resistance in Portuguese-speaking African Countries (PALOP): low-cost portable NGS platform for HIV-1 surveillance in Africa

An Evolutionary Model-Based Approach To Quantify the Genetic Barrier to Drug Resistance in Fast-Evolving Viruses and Its Application to HIV-1 Subtypes and Integrase Inhibitors

Drivers of HIV-1 transmission: The Portuguese case

Differential patterns of postmigration HIV-1 infection acquisition among Portuguese immigrants of different geographical origins

Applying Next-Generation Sequencing to Track HIV-1 Drug Resistance Mutations Circulating in Portugal

Short Communication: HIV and Tuberculosis Co-Infection Among Migrants in Portugal: A Brief Study on Their Sociodemographic, Clinical, and Genomic Characteristics

Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology

Adherence to antiretroviral therapy among HIV-1 patients from sub-Saharan Africa: a systematic review

The Role of Late Presenters in HIV-1 Transmission Clusters in Europe

The impact of HIV-1 within-host evolution on transmission dynamics

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