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Identification of Protein–Protein Interaction Sites from Docking Energy Landscapes

Journal of molecular biology, 2004-01, Vol.335 (3), p.843-865

2004

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Stabilization of G-Quadruplex DNA with Platinum(II) Schiff Base Complexes: Luminescent Probe and Down-Regulation of c-myc Oncogene Expression

Chemistry : a European journal, 2009-12, Vol.15 (47), p.13008-13021

2009

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Large-scale prediction of protein geometry and stability changes for arbitrary single point mutations

Proteins, structure, function, and bioinformatics, 2004-11, Vol.57 (2), p.400-413

2004

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ICM-DISCO docking by global energy optimization with fully flexible side-chains

Proteins, structure, function, and bioinformatics, 2003-07, Vol.52 (1), p.113-117

2003

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Discovery of antiandrogen activity of nonsteroidal scaffolds of marketed drugs

Proceedings of the National Academy of Sciences - PNAS, 2007-07, Vol.104 (29), p.11927-11932

2007

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Soft protein–protein docking in internal coordinates

Protein science, 2002-02, Vol.11 (2), p.280-291

2002

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Novel Anchorage of GluR2/3 to the Postsynaptic Density by the AMPA Receptor–Binding Protein ABP

Neuron (Cambridge, Mass.), 1998-09, Vol.21 (3), p.581-591

1998

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Adverse Effects of Cholinesterase Inhibitors in Dementia, According to the Pharmacovigilance Databases of the United-States and Canada

PloS one, 2015-12, Vol.10 (12), p.e0144337

2015

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XCMS: Processing Mass Spectrometry Data for Metabolite Profiling Using Nonlinear Peak Alignment, Matching, and Identification

Analytical chemistry (Washington), 2006-02, Vol.78 (3), p.779-787

2006

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Do aligned sequences share the same fold?

Journal of molecular biology, 1997-10, Vol.273 (1), p.355-368

1997

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Structure-based development of target-specific compound libraries

Drug discovery today, 2006-03, Vol.11 (5-6), p.261-266

2006

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Pocketome via Comprehensive Identification and Classification of Ligand Binding Envelopes

Molecular & cellular proteomics, 2005-06, Vol.4 (6), p.752-761

2005

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Spatial chemical distance based on atomic property fields

Journal of computer-aided molecular design, 2010-03, Vol.24 (3), p.173-182

2010

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Accurate Transferable Model for Water, n-Octanol, and n-Hexadecane Solvation Free Energies

The journal of physical chemistry. B, 2002-10, Vol.106 (42), p.11009-11015

2002

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Discovery of a Drug-Like G-Quadruplex Binding Ligand by High-Throughput Docking

ChemMedChem, 2008-06, Vol.3 (6), p.881-884

2008

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High-throughput docking for lead generation

Current Opinion in Chemical Biology, 2001-08, Vol.5 (4), p.375-382

2001

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Population scale retrospective analysis reveals distinctive antidepressant and anxiolytic effects of diclofenac, ketoprofen and naproxen in patients with pain

PloS one, 2018-04, Vol.13 (4), p.e0195521-e0195521

2018

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REVCOM: a robust Bayesian method for evolutionary rate estimation

Bioinformatics, 2005-05, Vol.21 (10), p.2315-2321

2005

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Status of GPCR Modeling and Docking as Reflected by Community-wide GPCR Dock 2010 Assessment

Structure (London), 2011-08, Vol.19 (8), p.1108-1126

2011

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METLIN: a metabolite mass spectral database

Therapeutic drug monitoring, 2005-12, Vol.27 (6), p.747

2005

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Molecular Mechanisms Deployed by Virally Encoded G Protein―Coupled Receptors in Human Diseases

Annual review of pharmacology and toxicology, 2013-01, Vol.53 (1), p.331-354

2013

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Statistical analysis and prediction of protein-protein interfaces

Proteins, structure, function, and bioinformatics, 2005-08, Vol.60 (3), p.353-366

2005

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Hybrid receptor structure/ligand-based docking and activity prediction in ICM: development and evaluation in D3R Grand Challenge 3

Journal of computer-aided molecular design, 2019-01, Vol.33 (1), p.35-46

2019

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Direct Derivation of van der Waals Force Field Parameters from Quantum Mechanical Interaction Energies

The journal of physical chemistry. B, 2003-09, Vol.107 (35), p.9601-9609

2003

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TSG101 may be the prototype of a class of dominant negative ubiquitin regulators

Nature genetics, 1997-08, Vol.16 (4), p.330-331

1997

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Identification of Protein–Protein Interaction Sites from Docking Energy Landscapes

Stabilization of G-Quadruplex DNA with Platinum(II) Schiff Base Complexes: Luminescent Probe and Down-Regulation of c-myc Oncogene Expression

Large-scale prediction of protein geometry and stability changes for arbitrary single point mutations

ICM-DISCO docking by global energy optimization with fully flexible side-chains

Discovery of antiandrogen activity of nonsteroidal scaffolds of marketed drugs

Soft protein–protein docking in internal coordinates

Novel Anchorage of GluR2/3 to the Postsynaptic Density by the AMPA Receptor–Binding Protein ABP

Adverse Effects of Cholinesterase Inhibitors in Dementia, According to the Pharmacovigilance Databases of the United-States and Canada

XCMS: Processing Mass Spectrometry Data for Metabolite Profiling Using Nonlinear Peak Alignment, Matching, and Identification

Do aligned sequences share the same fold?

Structure-based development of target-specific compound libraries

Pocketome via Comprehensive Identification and Classification of Ligand Binding Envelopes

Spatial chemical distance based on atomic property fields

Accurate Transferable Model for Water, n-Octanol, and n-Hexadecane Solvation Free Energies

Discovery of a Drug-Like G-Quadruplex Binding Ligand by High-Throughput Docking

High-throughput docking for lead generation

Population scale retrospective analysis reveals distinctive antidepressant and anxiolytic effects of diclofenac, ketoprofen and naproxen in patients with pain

REVCOM: a robust Bayesian method for evolutionary rate estimation

Status of GPCR Modeling and Docking as Reflected by Community-wide GPCR Dock 2010 Assessment

METLIN: a metabolite mass spectral database

Molecular Mechanisms Deployed by Virally Encoded G Protein―Coupled Receptors in Human Diseases

Statistical analysis and prediction of protein-protein interfaces

Hybrid receptor structure/ligand-based docking and activity prediction in ICM: development and evaluation in D3R Grand Challenge 3

Direct Derivation of van der Waals Force Field Parameters from Quantum Mechanical Interaction Energies

TSG101 may be the prototype of a class of dominant negative ubiquitin regulators

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