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A phylogenomic framework for charting the diversity and evolution of giant viruses

PLoS biology, 2021-10, Vol.19 (10), p.e3001430

2021

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Dynamic genome evolution and complex virocell metabolism of globally-distributed giant viruses

Nature communications, 2020-04, Vol.11 (1), p.1710-1710, Article 1710

2020

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Genome size distributions in bacteria and archaea are strongly linked to evolutionary history at broad phylogenetic scales

PLoS genetics, 2022-05, Vol.18 (5), p.e1010220

2022

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ViralRecall-A Flexible Command-Line Tool for the Detection of Giant Virus Signatures in 'Omic Data

Viruses, 2021-01, Vol.13 (2), p.150

2021

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complete genome sequence of fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist

PloS one, 2011-04, Vol.6 (4), p.e18814-e18814

2011

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A distinct lineage of Caudovirales that encodes a deeply branching multi-subunit RNA polymerase

Nature communications, 2020-09, Vol.11 (1), p.4506-4506, Article 4506

2020

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Diel cycling and long-term persistence of viruses in the ocean’s euphotic zone

Proceedings of the National Academy of Sciences - PNAS, 2017-10, Vol.114 (43), p.11446-11451

2017

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Microbial community transcriptional networks are conserved in three domains at ocean basin scales

Proceedings of the National Academy of Sciences - PNAS, 2015-04, Vol.112 (17), p.5443-5448

2015

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Mountain Pine Beetles Colonizing Historical and Naïve Host Trees Are Associated with a Bacterial Community Highly Enriched in Genes Contributing to Terpene Metabolism

Applied and Environmental Microbiology, 2013-06, Vol.79 (11), p.3468-3475

2013

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Comparative Genomics and Environmental Distribution of Large dsDNA Viruses in the Family Asfarviridae

Frontiers in microbiology, 2021-03, Vol.12, p.657471-657471

2021

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Diversity and genomics of giant viruses in the North Pacific Subtropical Gyre

Frontiers in microbiology, 2022-11, Vol.13, p.1021923-1021923

2022

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Heterotrophic Thaumarchaea with Small Genomes Are Widespread in the Dark Ocean

mSystems, 2020-06, Vol.5 (3)

2020

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Viral Complexity

Biomolecules (Basel, Switzerland), 2022-07, Vol.12 (8), p.1061

2022

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Triassic origin and early radiation of multicellular volvocine algae

Proceedings of the National Academy of Sciences - PNAS, 2009-03, Vol.106 (9), p.3254-3258

2009

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Bacteriophage Distributions and Temporal Variability in the Ocean's Interior

mBio, 2017-11, Vol.8 (6)

2017

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The genome sequences of Cellulomonas fimi and "Cellvibrio gilvus" reveal the cellulolytic strategies of two facultative anaerobes, transfer of "Cellvibrio gilvus" to the genus Cellulomonas, and proposal of Cellulomonas gilvus sp. nov

PloS one, 2013-01, Vol.8 (1), p.e53954-e53954

2013

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Comparison of 26 Sphingomonad Genomes Reveals Diverse Environmental Adaptations and Biodegradative Capabilities

Applied and Environmental Microbiology, 2013-06, Vol.79 (12), p.3724-3733

2013

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FastViromeExplorer: a pipeline for virus and phage identification and abundance profiling in metagenomics data

PeerJ (San Francisco, CA), 2018-01, Vol.6, p.e4227-e4227, Article e4227

2018

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Parallel Evolution of Genome Streamlining and Cellular Bioenergetics across the Marine Radiation of a Bacterial Phylum

mBio, 2018-09, Vol.9 (5)

2018

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A timeline of bacterial and archaeal diversification in the ocean

eLife, 2023-12, Vol.12

2023

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Microbiology: The curious case of the mysterious mirusvirus

Current biology, 2023-12, Vol.33 (23), p.R1234-R1235

Aylward, Frank O.

2023

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Wind and sunlight shape microbial diversity in surface waters of the North Pacific Subtropical Gyre

The ISME Journal, 2016-06, Vol.10 (6), p.1308-1322

2016

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Assessing the biogeography of marine giant viruses in four oceanic transects

ISME Communications, 2023-04, Vol.3 (1)

2023

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High Transcriptional Activity and Diverse Functional Repertoires of Hundreds of Giant Viruses in a Coastal Marine System

mSystems, 2021-08, Vol.6 (4), p.e0029321-e0029321

2021

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Soil Bacterial and Fungal Communities Exhibit Distinct Long-Term Responses to Disturbance in Temperate Forests

Frontiers in microbiology, 2019-12, Vol.10, p.2872-2872

2019

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A phylogenomic framework for charting the diversity and evolution of giant viruses

Dynamic genome evolution and complex virocell metabolism of globally-distributed giant viruses

Genome size distributions in bacteria and archaea are strongly linked to evolutionary history at broad phylogenetic scales

ViralRecall-A Flexible Command-Line Tool for the Detection of Giant Virus Signatures in 'Omic Data

complete genome sequence of fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist

A distinct lineage of Caudovirales that encodes a deeply branching multi-subunit RNA polymerase

Diel cycling and long-term persistence of viruses in the ocean’s euphotic zone

Microbial community transcriptional networks are conserved in three domains at ocean basin scales

Mountain Pine Beetles Colonizing Historical and Naïve Host Trees Are Associated with a Bacterial Community Highly Enriched in Genes Contributing to Terpene Metabolism

Comparative Genomics and Environmental Distribution of Large dsDNA Viruses in the Family Asfarviridae

Diversity and genomics of giant viruses in the North Pacific Subtropical Gyre

Heterotrophic Thaumarchaea with Small Genomes Are Widespread in the Dark Ocean

Viral Complexity

Triassic origin and early radiation of multicellular volvocine algae

Bacteriophage Distributions and Temporal Variability in the Ocean's Interior

The genome sequences of Cellulomonas fimi and "Cellvibrio gilvus" reveal the cellulolytic strategies of two facultative anaerobes, transfer of "Cellvibrio gilvus" to the genus Cellulomonas, and proposal of Cellulomonas gilvus sp. nov

Comparison of 26 Sphingomonad Genomes Reveals Diverse Environmental Adaptations and Biodegradative Capabilities

FastViromeExplorer: a pipeline for virus and phage identification and abundance profiling in metagenomics data

Parallel Evolution of Genome Streamlining and Cellular Bioenergetics across the Marine Radiation of a Bacterial Phylum

A timeline of bacterial and archaeal diversification in the ocean

Microbiology: The curious case of the mysterious mirusvirus

Wind and sunlight shape microbial diversity in surface waters of the North Pacific Subtropical Gyre

Assessing the biogeography of marine giant viruses in four oceanic transects

High Transcriptional Activity and Diverse Functional Repertoires of Hundreds of Giant Viruses in a Coastal Marine System

Soil Bacterial and Fungal Communities Exhibit Distinct Long-Term Responses to Disturbance in Temperate Forests

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