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SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions

Nucleic acids research, 2012-11, Vol.40 (21), p.10628-10641

2012

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Systematic discovery of new recognition peptides mediating protein interaction networks

PLoS biology, 2005-12, Vol.3 (12), p.e405-e405

2005

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CTCF-Mediated Chromatin Loops between Promoter and Gene Body Regulate Alternative Splicing across Individuals

Cell systems, 2017-12, Vol.5 (6), p.628-637.e6

2017

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Brucella NpeA is a secreted Type IV effector containing an N-WASP-binding short linear motif that promotes niche formation

mBio, 2024-07, Vol.15 (7), p.e0072624

2024

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Multiple sequence alignment using ClustalW and ClustalX

Current Protocols in Bioinformatics, 2002-08, Vol.Chapter 2 (1), p.Unit 2.3

2002

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Cell regulation: determined to signal discrete cooperation

Trends in biochemical sciences (Amsterdam. Regular ed.), 2009-10, Vol.34 (10), p.471-482

Gibson, Toby J.

2009

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The transience of transient overexpression

Nature methods, 2013-08, Vol.10 (8), p.715-721

2013

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How viruses hijack cell regulation

Trends in biochemical sciences (Amsterdam. Regular ed.), 2011-03, Vol.36 (3), p.159-169

2011

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Evidence for the concerted evolution between short linear protein motifs and their flanking regions

PloS one, 2009-07, Vol.4 (7), p.e6052-e6052

2009

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Phosphorylation of S776 and 14-3-3 binding modulate ataxin-1 interaction with splicing factors

PloS one, 2009-12, Vol.4 (12), p.e8372-e8372

2009

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Mimicry of Short Linear Motifs by Bacterial Pathogens: A Drugging Opportunity

Trends in biochemical sciences (Amsterdam. Regular ed.), 2020-06, Vol.45 (6), p.526-544

2020

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Elution Profile Analysis of SDS-induced Subcomplexes by Quantitative Mass Spectrometry

Molecular & cellular proteomics, 2014-05, Vol.13 (5), p.1382-1391

2014

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Degrons in cancer

Science signaling, 2017-03, Vol.10 (470)

2017

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Dimerization and Protein Binding Specificity of the U2AF Homology Motif of the Splicing Factor Puf60

The Journal of biological chemistry, 2009-01, Vol.284 (1), p.630-639

2009

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A structure filter for the Eukaryotic Linear Motif Resource

BMC bioinformatics, 2009-10, Vol.10 (1), p.351-351, Article 351

2009

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NINL and DZANK1 Co-function in Vesicle Transport and Are Essential for Photoreceptor Development in Zebrafish

PLoS genetics, 2015-10, Vol.11 (10), p.e1005574-e1005574

2015

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RACK1 research – ships passing in the night?

FEBS letters, 2012-08, Vol.586 (17), p.2787-2789

Gibson, Toby J.

2012

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Phospho.ELM: a database of phosphorylation sites--update 2011

Nucleic acids research, 2011-01, Vol.39 (Database issue), p.D261-D267

2011

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Divergent Evolution of a Protein–Protein Interaction Revealed through Ancestral Sequence Reconstruction and Resurrection

Molecular biology and evolution, 2021-01, Vol.38 (1), p.152-167

2021

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A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences

BMC bioinformatics, 2008-05, Vol.9 (1), p.229-229, Article 229

2008

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ELM 2016--data update and new functionality of the eukaryotic linear motif resource

Nucleic acids research, 2016-01, Vol.44 (D1), p.D294

2016

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Attributes of short linear motifs

Molecular bioSystems, 2012-01, Vol.8 (1), p.268-281

2012

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Metabolic shifts in residual breast cancer drive tumor recurrence

The Journal of clinical investigation, 2017-06, Vol.127 (6), p.2091-2105

2017

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[22] Using CLUSTAL for multiple sequence alignments

Methods in Enzymology, 1996, Vol.266, p.383-402

1996

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A conserved motif in the disordered linker of human MLH1 is vital for DNA mismatch repair and its function is diminished by a cancer family mutation

Nucleic acids research, 2023-07, Vol.51 (12), p.6307-6320

2023

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SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions

Systematic discovery of new recognition peptides mediating protein interaction networks

CTCF-Mediated Chromatin Loops between Promoter and Gene Body Regulate Alternative Splicing across Individuals

Brucella NpeA is a secreted Type IV effector containing an N-WASP-binding short linear motif that promotes niche formation

Multiple sequence alignment using ClustalW and ClustalX

Cell regulation: determined to signal discrete cooperation

The transience of transient overexpression

How viruses hijack cell regulation

Evidence for the concerted evolution between short linear protein motifs and their flanking regions

Phosphorylation of S776 and 14-3-3 binding modulate ataxin-1 interaction with splicing factors

Mimicry of Short Linear Motifs by Bacterial Pathogens: A Drugging Opportunity

Elution Profile Analysis of SDS-induced Subcomplexes by Quantitative Mass Spectrometry

Degrons in cancer

Dimerization and Protein Binding Specificity of the U2AF Homology Motif of the Splicing Factor Puf60

A structure filter for the Eukaryotic Linear Motif Resource

NINL and DZANK1 Co-function in Vesicle Transport and Are Essential for Photoreceptor Development in Zebrafish

RACK1 research – ships passing in the night?

Phospho.ELM: a database of phosphorylation sites--update 2011

Divergent Evolution of a Protein–Protein Interaction Revealed through Ancestral Sequence Reconstruction and Resurrection

A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences

ELM 2016--data update and new functionality of the eukaryotic linear motif resource

Attributes of short linear motifs

Metabolic shifts in residual breast cancer drive tumor recurrence

[22] Using CLUSTAL for multiple sequence alignments

A conserved motif in the disordered linker of human MLH1 is vital for DNA mismatch repair and its function is diminished by a cancer family mutation

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