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Complex dynamics of synergistic coinfections on realistically clustered networks

Proceedings of the National Academy of Sciences - PNAS, 2015-08, Vol.112 (33), p.10551-10556

2015

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Detecting the impact of temperature on transmission of Zika, dengue, and chikungunya using mechanistic models

PLoS neglected tropical diseases, 2017-04, Vol.11 (4), p.e0005568-e0005568

2017

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Developing a dengue forecast model using machine learning: A case study in China

PLoS neglected tropical diseases, 2017-10, Vol.11 (10), p.e0005973-e0005973

2017

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Big Data Sensors of Organic Advocacy: The Case of Leonardo DiCaprio and Climate Change

PloS one, 2016-08, Vol.11 (8), p.e0159885-e0159885

2016

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Dengue Baidu Search Index data can improve the prediction of local dengue epidemic: A case study in Guangzhou, China

PLoS neglected tropical diseases, 2017-03, Vol.11 (3), p.e0005354-e0005354

2017

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Asymmetric percolation drives a double transition in sexual contact networks

Proceedings of the National Academy of Sciences - PNAS, 2017-08, Vol.114 (34), p.8969-8973

2017

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Internet-based biosurveillance methods for vector-borne diseases: Are they novel public health tools or just novelties?

PLoS neglected tropical diseases, 2017-11, Vol.11 (11), p.e0005871-e0005871

2017

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Uncovering the hidden cost of bed bugs

Proceedings of the National Academy of Sciences - PNAS, 2019-04, Vol.116 (15), p.7160-7162

2019

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Dengue prediction by the web: Tweets are a useful tool for estimating and forecasting Dengue at country and city level

PLoS neglected tropical diseases, 2017-07, Vol.11 (7), p.e0005729

2017

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Performance of early warning signals for disease re-emergence: A case study on COVID-19 data

PLoS computational biology, 2022-03, Vol.18 (3), p.e1009958-e1009958

2022

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eXplainable Artificial Intelligence (XAI) for the identification of biologically relevant gene expression patterns in longitudinal human studies, insights from obesity research

PLoS computational biology, 2020-04, Vol.16 (4), p.e1007792-e1007792

2020

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Forecasting of influenza activity and associated hospital admission burden and estimating the impact of COVID-19 pandemic on 2019/20 winter season in Hong Kong

PLoS computational biology, 2024-07, Vol.20 (7), p.e1012311

2024

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Epidemiological modeling of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) reveals conditions for introduction and widespread transmission

PLoS computational biology, 2024-07, Vol.20 (7), p.e1012263

2024

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The multi-dimensional challenges of controlling respiratory virus transmission in indoor spaces: Insights from the linkage of a microscopic pedestrian simulation and SARS-CoV-2 transmission model

PLoS computational biology, 2024-03, Vol.20 (3), p.e1011956-e1011956

2024

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Beyond ranking nodes: Predicting epidemic outbreak sizes by network centralities

PLoS computational biology, 2020-07, Vol.16 (7), p.e1008052-e1008052

2020

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Imaging with spatio-temporal modelling to characterize the dynamics of plant-pathogen lesions

PLoS computational biology, 2023-11, Vol.19 (11), p.e1011627-e1011627

2023

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Temperature modulates dengue virus epidemic growth rates through its effects on reproduction numbers and generation intervals

PLoS neglected tropical diseases, 2017-07, Vol.11 (7), p.e0005797

2017

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Towards a data-driven characterization of behavioral changes induced by the seasonal flu

PLoS computational biology, 2020-05, Vol.16 (5), p.e1007879-e1007879

2020

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Combining the dynamic model and deep neural networks to identify the intensity of interventions during COVID-19 pandemic

PLoS computational biology, 2023-10, Vol.19 (10), p.e1011535-e1011535

2023

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Spatio-temporal dynamics of dengue in Brazil: Seasonal travelling waves and determinants of regional synchrony

PLoS neglected tropical diseases, 2019-04, Vol.13 (4), p.e0007012-e0007012

2019

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Analysing pneumococcal invasiveness using Bayesian models of pathogen progression rates

PLoS computational biology, 2022-02, Vol.18 (2), p.e1009389

2022

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Inferring the effective reproductive number from deterministic and semi-deterministic compartmental models using incidence and mobility data

PLoS computational biology, 2022-06, Vol.18 (6), p.e1010206

2022

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Estimating the contribution of HIV-infected adults to household pneumococcal transmission in South Africa, 2016-2018: A hidden Markov modelling study

PLoS computational biology, 2021-12, Vol.17 (12), p.e1009680-e1009680

2021

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Examining the impact of ICU population interaction structure on modeled colonization dynamics of Staphylococcus aureus

PLoS computational biology, 2022-07, Vol.18 (7), p.e1010352-e1010352

2022

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Optimizing laboratory-based surveillance networks for monitoring multi-genotype or multi-serotype infections

PLoS computational biology, 2022-09, Vol.18 (9), p.e1010575

2022

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Complex dynamics of synergistic coinfections on realistically clustered networks

Detecting the impact of temperature on transmission of Zika, dengue, and chikungunya using mechanistic models

Developing a dengue forecast model using machine learning: A case study in China

Big Data Sensors of Organic Advocacy: The Case of Leonardo DiCaprio and Climate Change

Dengue Baidu Search Index data can improve the prediction of local dengue epidemic: A case study in Guangzhou, China

Asymmetric percolation drives a double transition in sexual contact networks

Internet-based biosurveillance methods for vector-borne diseases: Are they novel public health tools or just novelties?

Uncovering the hidden cost of bed bugs

Dengue prediction by the web: Tweets are a useful tool for estimating and forecasting Dengue at country and city level

Performance of early warning signals for disease re-emergence: A case study on COVID-19 data

eXplainable Artificial Intelligence (XAI) for the identification of biologically relevant gene expression patterns in longitudinal human studies, insights from obesity research

Forecasting of influenza activity and associated hospital admission burden and estimating the impact of COVID-19 pandemic on 2019/20 winter season in Hong Kong

Epidemiological modeling of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) reveals conditions for introduction and widespread transmission

The multi-dimensional challenges of controlling respiratory virus transmission in indoor spaces: Insights from the linkage of a microscopic pedestrian simulation and SARS-CoV-2 transmission model

Beyond ranking nodes: Predicting epidemic outbreak sizes by network centralities

Imaging with spatio-temporal modelling to characterize the dynamics of plant-pathogen lesions

Temperature modulates dengue virus epidemic growth rates through its effects on reproduction numbers and generation intervals

Towards a data-driven characterization of behavioral changes induced by the seasonal flu

Combining the dynamic model and deep neural networks to identify the intensity of interventions during COVID-19 pandemic

Spatio-temporal dynamics of dengue in Brazil: Seasonal travelling waves and determinants of regional synchrony

Analysing pneumococcal invasiveness using Bayesian models of pathogen progression rates

Inferring the effective reproductive number from deterministic and semi-deterministic compartmental models using incidence and mobility data

Estimating the contribution of HIV-infected adults to household pneumococcal transmission in South Africa, 2016-2018: A hidden Markov modelling study

Examining the impact of ICU population interaction structure on modeled colonization dynamics of Staphylococcus aureus

Optimizing laboratory-based surveillance networks for monitoring multi-genotype or multi-serotype infections

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