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Computational Reconstruction of Multidomain Proteins Using Atomic Force Microscopy Data

Structure (London), 2012-01, Vol.20 (1), p.113-120

2012

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Combining H/D Exchange Mass Spectrometry and Computational Docking To Derive the Structure of Protein–Protein Complexes

Biochemistry (Easton), 2017-12, Vol.56 (48), p.6329-6342

2017

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Protein docking using continuum electrostatics and geometric fit

Protein engineering, 2001-02, Vol.14 (2), p.105-113

2001

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XPD Helicase Structures and Activities: Insights into the Cancer and Aging Phenotypes from XPD Mutations

Cell, 2008-05, Vol.133 (5), p.789-800

2008

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Site‐targeted mutagenesis for stabilization of recombinant monoclonal antibody expressed in tobacco (Nicotiana tabacum) plants

The FASEB journal, 2016-04, Vol.30 (4), p.1590-1598

2016

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Identification of a New Cryptochrome Class: Structure, Function, and Evolution

Molecular cell, 2003, Vol.11 (1), p.59-67

2003

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Predicting protein-DNA interactions by full search computational docking

Proteins, structure, function, and bioinformatics, 2013-12, Vol.81 (12), p.2106-2118

2013

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Combining H/D exchange mass spectroscopy and computational docking reveals extended DNA-binding surface on uracil-DNA glycosylase

Nucleic acids research, 2012-07, Vol.40 (13), p.6070-6081

2012

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MDB: the Metalloprotein Database and Browser at The Scripps Research Institute

Nucleic acids research, 2002-01, Vol.30 (1), p.379-382

2002

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Structural basis for preferential binding of non-ortho-substituted polychlorinated biphenyls by the monoclonal antibody S2B1

Journal of molecular recognition, 2005-07, Vol.18 (4), p.282-294

2005

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Prediction of HIV-1 Integrase/Viral DNA Interactions in the Catalytic Domain by Fast Molecular Docking

Journal of medicinal chemistry, 2004-02, Vol.47 (4), p.821-828

2004

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Predicting interactions of winged-helix transcription factors with DNA

Proteins, structure, function, and bioinformatics, 2004-10, Vol.57 (1), p.172-187

2004

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Site-Directed Mutagenesis of a Catalytic Antibody: An Arginine and a Histidine Residue Play Key Roles

Biochemistry (Easton), 1994-03, Vol.33 (8), p.1994-2003

1994

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Structure and energetics of ligand binding to proteins: Escherichia coli dihydrofolate reductase-trimethoprim, a drug-receptor system

Proteins, structure, function, and bioinformatics, 1988, Vol.4 (1), p.31-47

1988

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Finding needles in haystacks: Reranking DOT results by using shape complementarity, cluster analysis, and biological information

Proteins, structure, function, and bioinformatics, 2003-07, Vol.52 (1), p.33-40

2003

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Stabilization of bound polycyclic aromatic hydrocarbons by a π-cation interaction

Journal of molecular biology, 2000-09, Vol.302 (3), p.691-699

2000

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Proximal microdeletions and microduplications of 1q21.1 contribute to variable abnormal phenotypes

European journal of human genetics : EJHG, 2012-07, Vol.20 (7), p.754-761

2012

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National study of NAFLD management identifies variation in delivery of care in the UK between 2019 to 2022

JHEP reports, 2023-12, Vol.5 (12), p.100897-100897, Article 100897

2023

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The diagnosis of urinary tract infections in young children (DUTY): protocol for a diagnostic and prospective observational study to derive and validate a clinical algorithm for the diagnosis of UTI in children presenting to primary care with an acute illness

BMC infectious diseases, 2012-07, Vol.12 (1), p.158-158, Article 158

2012

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Definition of the interaction domain for cytochrome c on cytochrome c oxidase. III. Prediction of the docked complex by a complete, systematic search

The Journal of biological chemistry, 1999-12, Vol.274 (53), p.38051-38060

1999

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Influence of environment on the antifolate drug trimethoprim: energy minimization studies

Biochemistry (Easton), 1991-04, Vol.30 (14), p.3518-3526

1991

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Structural Basis for Amide Hydrolysis Catalyzed by the 43C9 Antibody

Journal of molecular biology, 1999-08, Vol.291 (2), p.329-345

1999

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Metal-binding sites in proteins

Current opinion in biotechnology, 1991-08, Vol.2 (4), p.582-591

1991

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Catalytic Antibody Model and Mutagenesis Implicate Arginine in Transition-state Stabilization

Journal of molecular biology, 1994-01, Vol.235 (3), p.1098-1116

1994

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Complex formation between Azotobacter vinelandii ferredoxin I and its physiological electron donor NADPH-ferredoxin reductase

The Journal of biological chemistry, 1999-01, Vol.274 (5), p.2978-2987

1999

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Computational Reconstruction of Multidomain Proteins Using Atomic Force Microscopy Data

Combining H/D Exchange Mass Spectrometry and Computational Docking To Derive the Structure of Protein–Protein Complexes

Protein docking using continuum electrostatics and geometric fit

XPD Helicase Structures and Activities: Insights into the Cancer and Aging Phenotypes from XPD Mutations

Site‐targeted mutagenesis for stabilization of recombinant monoclonal antibody expressed in tobacco (Nicotiana tabacum) plants

Identification of a New Cryptochrome Class: Structure, Function, and Evolution

Predicting protein-DNA interactions by full search computational docking

Combining H/D exchange mass spectroscopy and computational docking reveals extended DNA-binding surface on uracil-DNA glycosylase

MDB: the Metalloprotein Database and Browser at The Scripps Research Institute

Structural basis for preferential binding of non-ortho-substituted polychlorinated biphenyls by the monoclonal antibody S2B1

Prediction of HIV-1 Integrase/Viral DNA Interactions in the Catalytic Domain by Fast Molecular Docking

Predicting interactions of winged-helix transcription factors with DNA

Site-Directed Mutagenesis of a Catalytic Antibody: An Arginine and a Histidine Residue Play Key Roles

Structure and energetics of ligand binding to proteins: Escherichia coli dihydrofolate reductase-trimethoprim, a drug-receptor system

Finding needles in haystacks: Reranking DOT results by using shape complementarity, cluster analysis, and biological information

Stabilization of bound polycyclic aromatic hydrocarbons by a π-cation interaction

Proximal microdeletions and microduplications of 1q21.1 contribute to variable abnormal phenotypes

National study of NAFLD management identifies variation in delivery of care in the UK between 2019 to 2022

The diagnosis of urinary tract infections in young children (DUTY): protocol for a diagnostic and prospective observational study to derive and validate a clinical algorithm for the diagnosis of UTI in children presenting to primary care with an acute illness

Definition of the interaction domain for cytochrome c on cytochrome c oxidase. III. Prediction of the docked complex by a complete, systematic search

Influence of environment on the antifolate drug trimethoprim: energy minimization studies

Structural Basis for Amide Hydrolysis Catalyzed by the 43C9 Antibody

Metal-binding sites in proteins

Catalytic Antibody Model and Mutagenesis Implicate Arginine in Transition-state Stabilization

Complex formation between Azotobacter vinelandii ferredoxin I and its physiological electron donor NADPH-ferredoxin reductase

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