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Protein-folding dynamics: overview of molecular simulation techniques

Annual review of physical chemistry, 2007-01, Vol.58 (1), p.57-83

2007

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The Role of Hydrophobic Interactions in Initiation and Propagation of Protein Folding

Proceedings of the National Academy of Sciences - PNAS, 2006-08, Vol.103 (35), p.13057-13061

2006

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Coarse-grained force field: general folding theory

Physical chemistry chemical physics : PCCP, 2011-01, Vol.13 (38), p.16890-16901

2011

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My 65 years in protein chemistry

Quarterly reviews of biophysics, 2015-05, Vol.48 (2), p.117-177

Scheraga, Harold A.

2015

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Proline Cis−Trans Isomerization and Protein Folding

Biochemistry (Easton), 2002-12, Vol.41 (50), p.14637-14644

2002

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Investigation of Protein Folding by Coarse-Grained Molecular Dynamics with the UNRES Force Field

The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory, 2010-04, Vol.114 (13), p.4471-4485

2010

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Performance of protein-structure predictions with the physics-based UNRES force field in CASP11

Bioinformatics (Oxford, England), 2016-11, Vol.32 (21), p.3270-3278

2016

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PDZ Binding to the BAR Domain of PICK1 is Elucidated by Coarse-grained Molecular Dynamics

Journal of molecular biology, 2011-01, Vol.405 (1), p.298-314

2011

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Disulfide Bonds and Protein Folding

Biochemistry (Easton), 2000-04, Vol.39 (15), p.4207-4216

2000

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A comprehensive analysis of the computed tautomer fractions of the imidazole ring of histidines in Loligo vulgaris

Journal of biomolecular structure & dynamics, 2018-09, Vol.36 (12), p.3094-3105

2018

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CheShift-2: graphic validation of protein structures

Bioinformatics (Oxford, England), 2012-06, Vol.28 (11), p.1538-1539

2012

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Common functionally important motions of the nucleotide-binding domain of Hsp70

Proteins, structure, function, and bioinformatics, 2015-02, Vol.83 (2), p.282-299

2015

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From helix-coil transitions to protein folding

Biopolymers, 2008-05, Vol.89 (5), p.479-485

Scheraga, Harold A.

2008

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Oxidative Folding of Proteins

Accounts of chemical research, 2000-11, Vol.33 (11), p.805-812

2000

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FAMBE-pH: A Fast and Accurate Method to Compute the Total Solvation Free Energies of Proteins

The journal of physical chemistry. B, 2008-09, Vol.112 (35), p.11122-11136

2008

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Identification of Formation of Initial Native Structure in Onconase from an Unfolded State

Biochemistry (Easton), 2012-01, Vol.51 (1), p.521-532

2012

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Intramolecular Versus Intermolecular Disulfide Bonds in Prion Proteins

The Journal of biological chemistry, 2002-09, Vol.277 (36), p.33477-33481

2002

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Structural Determinants of Oxidative Folding in Proteins

Proceedings of the National Academy of Sciences - PNAS, 2001-02, Vol.98 (5), p.2312-2316

2001

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Stepwise Deamidation of Ribonuclease A at Five Sites Determined by Top Down Mass Spectrometry

Biochemistry (Easton), 2006-01, Vol.45 (3), p.987-992

2006

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Distributions of Intramolecular Distances in the Reduced and Denatured States of Bovine Pancreatic Ribonuclease A. Folding Initiation Structures in the C-Terminal Portions of the Reduced Protein

Biochemistry (Easton), 2001-01, Vol.40 (1), p.105-118

2001

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Correlation of folding kinetics with the number and isomerization states of prolines in three homologous proteins of the RNase family

FEBS letters, 2006-09, Vol.580 (21), p.5029-5032

2006

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Dissimilarity in the oxidative folding of onconase and ribonuclease A, two structural homologues

Protein engineering, design and selection, 2008-04, Vol.21 (4), p.223-231

2008

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The Oxidative Folding Rate of Bovine Pancreatic Ribonuclease Is Enhanced by a Covalently Attached Oligosaccharide

Biochemistry (Easton), 2005-07, Vol.44 (28), p.9817-9823

2005

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Implementation of a k/k(0) method to identify long-range structure in transition states during conformational folding/unfolding of proteins

Structure (London), 2007-10, Vol.15 (10), p.1178-1189

2007

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Regeneration of Bovine Pancreatic Ribonuclease A: Identification of Two Nativelike Three-Disulfide Intermediates Involved in Separate Pathways

Biochemistry (Easton), 1998-03, Vol.37 (11), p.3760-3766

1998

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Protein-folding dynamics: overview of molecular simulation techniques

The Role of Hydrophobic Interactions in Initiation and Propagation of Protein Folding

Coarse-grained force field: general folding theory

My 65 years in protein chemistry

Proline Cis−Trans Isomerization and Protein Folding

Investigation of Protein Folding by Coarse-Grained Molecular Dynamics with the UNRES Force Field

Performance of protein-structure predictions with the physics-based UNRES force field in CASP11

PDZ Binding to the BAR Domain of PICK1 is Elucidated by Coarse-grained Molecular Dynamics

Disulfide Bonds and Protein Folding

A comprehensive analysis of the computed tautomer fractions of the imidazole ring of histidines in Loligo vulgaris

CheShift-2: graphic validation of protein structures

Common functionally important motions of the nucleotide-binding domain of Hsp70

From helix-coil transitions to protein folding

Oxidative Folding of Proteins

FAMBE-pH: A Fast and Accurate Method to Compute the Total Solvation Free Energies of Proteins

Identification of Formation of Initial Native Structure in Onconase from an Unfolded State

Intramolecular Versus Intermolecular Disulfide Bonds in Prion Proteins

Structural Determinants of Oxidative Folding in Proteins

Stepwise Deamidation of Ribonuclease A at Five Sites Determined by Top Down Mass Spectrometry

Distributions of Intramolecular Distances in the Reduced and Denatured States of Bovine Pancreatic Ribonuclease A. Folding Initiation Structures in the C-Terminal Portions of the Reduced Protein

Correlation of folding kinetics with the number and isomerization states of prolines in three homologous proteins of the RNase family

Dissimilarity in the oxidative folding of onconase and ribonuclease A, two structural homologues

The Oxidative Folding Rate of Bovine Pancreatic Ribonuclease Is Enhanced by a Covalently Attached Oligosaccharide

Implementation of a k/k(0) method to identify long-range structure in transition states during conformational folding/unfolding of proteins

Regeneration of Bovine Pancreatic Ribonuclease A: Identification of Two Nativelike Three-Disulfide Intermediates Involved in Separate Pathways

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