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Environmental status assessment using DNA metabarcoding: towards a genetics based Marine Biotic Index (gAMBI)

PloS one, 2014-03, Vol.9 (3), p.e90529

2014

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Selecting RAD-Seq Data Analysis Parameters for Population Genetics: The More the Better?

Frontiers in genetics, 2019-05, Vol.10, p.533-533

2019

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Benchmarking DNA Metabarcoding for Biodiversity-Based Monitoring and Assessment

Frontiers in Marine Science, 2016-06, Vol.3

2016

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Pan‐regional marine benthic cryptobiome biodiversity patterns revealed by metabarcoding Autonomous Reef Monitoring Structures

Molecular ecology, 2020-12, Vol.29 (24), p.4882-4897

2020

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Vertical stratification of environmental DNA in the open ocean captures ecological patterns and behavior of deep‐sea fishes

Limnology and oceanography letters, 2021-12, Vol.6 (6), p.339-347

2021

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Unidirectional trans‐Atlantic gene flow and a mixed spawning area shape the genetic connectivity of Atlantic bluefin tuna

Molecular ecology, 2024-01, Vol.33 (1), p.e17188-n/a

2024

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Considerations for metabarcoding‐based port biological baseline surveys aimed at marine nonindigenous species monitoring and risk assessments

Ecology and evolution, 2020-03, Vol.10 (5), p.2452-2465

2020

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Whole transcriptome analysis of Acinetobacter baumannii assessed by RNA-sequencing reveals different mRNA expression profiles in biofilm compared to planktonic cells

PloS one, 2013-08, Vol.8 (8), p.e72968-e72968

2013

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The SAR11 group of alpha-proteobacteria is not related to the origin of mitochondria

PloS one, 2012-01, Vol.7 (1), p.e30520-e30520

2012

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An automated workflow to assess completeness and curate GenBank for environmental DNA metabarcoding: The marine fish assemblage as case study

Environmental DNA (Hoboken, N.J.), 2023-07, Vol.5 (4), p.634-647

2023

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Genetic Sex and Origin Identification Suggests Differential Migration of Male and Female Atlantic Bluefin Tuna (Thunnus thynnus) in the Northeast Atlantic

Evolutionary applications, 2024-09, Vol.17 (9), p.e70009-n/a

2024

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Oceanographic variation influences spatial genomic structure in the sea scallop, Placopecten magellanicus

Ecology and evolution, 2018-03, Vol.8 (5), p.2824-2841

2018

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Metabarcoding of marine zooplankton: prospects, progress and pitfalls

Journal of plankton research, 2016-05, Vol.38 (3), p.393-400

2016

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Marine Sediment Sample Pre-processing for Macroinvertebrates Metabarcoding: Mechanical Enrichment and Homogenization

Frontiers in Marine Science, 2016-10, Vol.3

2016

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Life in a drop: Sampling environmental DNA for marine fishery management and ecosystem monitoring

Marine policy, 2021-02, Vol.124, p.104331, Article 104331

2021

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Fine mapping of a major histocompatibility complex in ankylosing spondylitis: Association of the HLA–DPA1 and HLA–DPB1 regions

Arthritis & rheumatology (Hoboken, N.J.), 2011-11, Vol.63 (11), p.3305-3312

2011

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Phylogenomic evidence for separate acquisition of plastids in cryptophytes, haptophytes, and stramenopiles

Molecular biology and evolution, 2010-07, Vol.27 (7), p.1698-1709

2010

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Combining genetic markers with stable isotopes in otoliths reveals complexity in the stock structure of Atlantic bluefin tuna (Thunnus thynnus)

Scientific reports, 2020-09, Vol.10 (1), p.14675-14675, Article 14675

2020

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Increasing marine trophic web knowledge through DNA analyses of fish stomach content: a step towards an ecosystem‐based approach to fisheries research

Journal of fish biology, 2024-08, Vol.105 (2), p.431-443

2024

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Global mesozooplankton communities show lower connectivity in deep oceanic layers

Molecular ecology, 2024-10, Vol.33 (20), p.e17286-n/a

2024

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Quantifying genetic differentiation and population assignment between two contingents of Atlantic mackerel ( Scomber scombrus ) in the Northwest Atlantic

Canadian journal of fisheries and aquatic sciences, 2023-07, Vol.80 (7), p.1084-1097

2023

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Population structure of Atlantic mackerel inferred from RAD-seq-derived SNP markers: effects of sequence clustering parameters and hierarchical SNP selection

Molecular ecology resources, 2016-07, Vol.16 (4), p.991-1001

2016

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Best BLAST hit alone cannot be used as evidence of fraud

Scientific reports, 2023-01, Vol.13 (1), p.905-905, Article 905

2023

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Environmental status assessment using DNA metabarcoding: towards a genetics based Marine Biotic Index (gAMBI)

Selecting RAD-Seq Data Analysis Parameters for Population Genetics: The More the Better?

Benchmarking DNA Metabarcoding for Biodiversity-Based Monitoring and Assessment

Pan‐regional marine benthic cryptobiome biodiversity patterns revealed by metabarcoding Autonomous Reef Monitoring Structures

Vertical stratification of environmental DNA in the open ocean captures ecological patterns and behavior of deep‐sea fishes

Unidirectional trans‐Atlantic gene flow and a mixed spawning area shape the genetic connectivity of Atlantic bluefin tuna

Considerations for metabarcoding‐based port biological baseline surveys aimed at marine nonindigenous species monitoring and risk assessments

Whole transcriptome analysis of Acinetobacter baumannii assessed by RNA-sequencing reveals different mRNA expression profiles in biofilm compared to planktonic cells

The SAR11 group of alpha-proteobacteria is not related to the origin of mitochondria

Spatial dynamics and mixing of bluefin tuna in the Atlantic Ocean and Mediterranean Sea revealed using next‐generation sequencing

An automated workflow to assess completeness and curate GenBank for environmental DNA metabarcoding: The marine fish assemblage as case study

Genetic Sex and Origin Identification Suggests Differential Migration of Male and Female Atlantic Bluefin Tuna (Thunnus thynnus) in the Northeast Atlantic

Oceanographic variation influences spatial genomic structure in the sea scallop, Placopecten magellanicus

Metabarcoding of marine zooplankton: prospects, progress and pitfalls

Marine Sediment Sample Pre-processing for Macroinvertebrates Metabarcoding: Mechanical Enrichment and Homogenization

Trade‐offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on “Environmental DNA: What's behind the term?” by Pawlowski et al., (2020)

Life in a drop: Sampling environmental DNA for marine fishery management and ecosystem monitoring

Fine mapping of a major histocompatibility complex in ankylosing spondylitis: Association of the HLA–DPA1 and HLA–DPB1 regions

Phylogenomic evidence for separate acquisition of plastids in cryptophytes, haptophytes, and stramenopiles

Combining genetic markers with stable isotopes in otoliths reveals complexity in the stock structure of Atlantic bluefin tuna (Thunnus thynnus)

Increasing marine trophic web knowledge through DNA analyses of fish stomach content: a step towards an ecosystem‐based approach to fisheries research

Global mesozooplankton communities show lower connectivity in deep oceanic layers

Quantifying genetic differentiation and population assignment between two contingents of Atlantic mackerel ( Scomber scombrus ) in the Northwest Atlantic

Population structure of Atlantic mackerel inferred from RAD-seq-derived SNP markers: effects of sequence clustering parameters and hierarchical SNP selection

Best BLAST hit alone cannot be used as evidence of fraud

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