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Network medicine: a network-based approach to human disease

Nature reviews. Genetics, 2011-01, Vol.12 (1), p.56-68

2011

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Quantitative Whole Genome Sequencing of Circulating Tumor Cells Enables Personalized Combination Therapy of Metastatic Cancer

Cancer research (Chicago, Ill.), 2017-08, Vol.77 (16), p.4530-4541

2017

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A disease module in the interactome explains disease heterogeneity, drug response and captures novel pathways and genes in asthma

Human molecular genetics, 2015-06, Vol.24 (11), p.3005-3020

2015

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Emergent criticality through adaptive information processing in boolean networks

Physical review letters, 2012-03, Vol.108 (12), p.128702-128702, Article 128702

2012

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Mapping the evolution of scientific fields

PloS one, 2010-05, Vol.5 (5), p.e10355-e10355

2010

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Detection and phasing of single base de novo mutations in biopsies from human in vitro fertilized embryos by advanced whole-genome sequencing

Genome research, 2015-03, Vol.25 (3), p.426-434

2015

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Optimization in gradient networks

Chaos (Woodbury, N.Y.), 2007-06, Vol.17 (2), p.026105-026105-4

Gulbahce, Natali

2007

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Viral perturbations of host networks reflect disease etiology

PLoS computational biology, 2012-06, Vol.8 (6), p.e1002531-e1002531

2012

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684 Assay development and quantitative detection of ADI-001, a CD20-targeted γδ1 CAR T therapy, using AlloCell, a universal assay for monitoring of off-the-shelf allogeneic cell therapies

Journal for immunotherapy of cancer, 2023-11, Vol.11 (Suppl 1), p.A777-A777

2023

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Damage spreading and criticality in finite random dynamical networks

Physical review letters, 2007-12, Vol.99 (24), p.248701-248701, Article 248701

2007

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Spontaneous reaction silencing in metabolic optimization

PLoS computational biology, 2008-12, Vol.4 (12), p.e1000236-e1000236

2008

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art of community detection

BioEssays, 2008-10, Vol.30 (10), p.934-938

2008

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232.5: Identification of the Source of Donor Derived Cell-free DNA in A Kidney-pancreas Transplant Recipient: Case Study

Transplantation, 2022-09, Vol.106 (9S), p.S80-S80

2022

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Universal Sensitive, Accurate and Precise Microchimerism Surveillance Solution for Allogeneic Hematopoietic Cell Transplant

Blood, 2020-11, Vol.136 (Supplement 1), p.32-33

2020

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Local structure of directed networks

Physical review letters, 2008-03, Vol.100 (11), p.118701-118701, Article 118701

2008

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Extensive sequencing of seven human genomes to characterize benchmark reference materials

Scientific data, 2016-06, Vol.3 (1), p.160025, Article 160025

2016

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Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins

Nature (London), 2012-07, Vol.487 (7408), p.491-495

2012

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Global Mapping of the Inc-Human Interactome Reveals that Retromer Restricts Chlamydia Infection

Cell host & microbe, 2015-07, Vol.18 (1), p.109-121

2015

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MicroRNA-21 Integrates Pathogenic Signaling to Control Pulmonary Hypertension: Results of a Network Bioinformatics Approach

Circulation (New York, N.Y.), 2012-03, Vol.125 (12), p.1520-1532

2012

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High levels of donor‐derived cell‐free DNA in a case of graft‐versus‐host‐disease following liver transplantation

American journal of transplantation, 2022-03, Vol.22 (3), p.973-976

2022

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Nuances in the interpretation and utility of donor-derived cell-free DNA in lung transplantation following allogeneic hematopoietic stem cell transplantation – Case report

Transplant immunology, 2024-06, Vol.84, p.102055-102055, Article 102055

2024

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DETECTION OF DONOR-DERIVED CELL-FREE DNA: NON-INVASIVE PREDICTION OF SILENT ANTIBODY-MEDIATED REJECTION IN DONOR-SPECIFIC ANTIBODY-POSITIVE RENAL ALLOGRAFT RECIPIENTS

Transplantation, 2020-09, Vol.104 (S3), p.S356-S356

2020

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Algorithm for counting large directed loops

Journal of physics. A, Mathematical and theoretical, 2008-06, Vol.41 (22), p.224003

2008

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Predicting synthetic rescues in metabolic networks

Molecular systems biology, 2008, Vol.4 (1), p.168-n/a

2008

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Network medicine: a network-based approach to human disease

Quantitative Whole Genome Sequencing of Circulating Tumor Cells Enables Personalized Combination Therapy of Metastatic Cancer

A disease module in the interactome explains disease heterogeneity, drug response and captures novel pathways and genes in asthma

Emergent criticality through adaptive information processing in boolean networks

Mapping the evolution of scientific fields

Detection and phasing of single base de novo mutations in biopsies from human in vitro fertilized embryos by advanced whole-genome sequencing

Optimization in gradient networks

Viral perturbations of host networks reflect disease etiology

684 Assay development and quantitative detection of ADI-001, a CD20-targeted γδ1 CAR T therapy, using AlloCell, a universal assay for monitoring of off-the-shelf allogeneic cell therapies

Damage spreading and criticality in finite random dynamical networks

Spontaneous reaction silencing in metabolic optimization

art of community detection

232.5: Identification of the Source of Donor Derived Cell-free DNA in A Kidney-pancreas Transplant Recipient: Case Study

Universal Sensitive, Accurate and Precise Microchimerism Surveillance Solution for Allogeneic Hematopoietic Cell Transplant

Global landscape of HIV-human protein complexes

Local structure of directed networks

Extensive sequencing of seven human genomes to characterize benchmark reference materials

Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins

Global Mapping of the Inc-Human Interactome Reveals that Retromer Restricts Chlamydia Infection

MicroRNA-21 Integrates Pathogenic Signaling to Control Pulmonary Hypertension: Results of a Network Bioinformatics Approach

High levels of donor‐derived cell‐free DNA in a case of graft‐versus‐host‐disease following liver transplantation

Nuances in the interpretation and utility of donor-derived cell-free DNA in lung transplantation following allogeneic hematopoietic stem cell transplantation – Case report

DETECTION OF DONOR-DERIVED CELL-FREE DNA: NON-INVASIVE PREDICTION OF SILENT ANTIBODY-MEDIATED REJECTION IN DONOR-SPECIFIC ANTIBODY-POSITIVE RENAL ALLOGRAFT RECIPIENTS

Algorithm for counting large directed loops

Predicting synthetic rescues in metabolic networks

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