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Gigantic Genomes Provide Empirical Tests of Transposable Element Dynamics Models

Genomics, proteomics & bioinformatics, 2021-02, Vol.19 (1), p.123-139

2021

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Closing the ring: historical biogeography of the salamander ring species Ensatina eschscholtzii

Journal of biogeography, 2009-05, Vol.36 (5), p.982-995

2009

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piRNAs and Evolutionary Trajectories in Genome Size and Content

Journal of molecular evolution, 2017-12, Vol.85 (5-6), p.169-171

Mueller, Rachel Lockridge

2017

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Gigantic genomes of salamanders indicate that body temperature, not genome size, is the driver of global methylation and 5‐methylcytosine deamination in vertebrates

Evolution, 2022-05, Vol.76 (5), p.1052-1061

2022

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Phylogenomics Reveals Ancient Gene Tree Discordance in the Amphibian Tree of Life

Systematic biology, 2021-01, Vol.70 (1), p.49-66

2021

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Genome sequence of the Asian Tiger mosquito,Aedes albopictus,reveals insights into its biology, genetics, and evolution

Proceedings of the National Academy of Sciences - PNAS, 2015-11, Vol.112 (44), p.E5907-E5915

2015

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Evolutionary Rates, Divergence Dates, and the Performance of Mitochondrial Genes in Bayesian Phylogenetic Analysis

Systematic biology, 2006-04, Vol.55 (2), p.289-300

2006

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Genome size drives morphological evolution in organ‐specific ways

Evolution, 2022-07, Vol.76 (7), p.1453-1468

2022

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Polymorphic duplicate genes and persistent non-coding sequences reveal heterogeneous patterns of mitochondrial DNA loss in salamanders

BMC genomics, 2017-12, Vol.18 (1), p.992-992, Article 992

2017

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DNA transposons have colonized the genome of the giant virus Pandoravirus salinus

BMC biology, 2015-06, Vol.13 (1), p.38-38, Article 38

2015

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Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders

Zoology (Jena), 2008-01, Vol.111 (3), p.218-230

2008

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A new time-scale for ray-finned fish evolution

Proceedings of the Royal Society. B, Biological sciences, 2007-02, Vol.274 (1609), p.489-498

2007

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Molecular mechanisms of extensive mitochondrial gene rearrangement in plethodontid salamanders

Molecular biology and evolution, 2005-10, Vol.22 (10), p.2104-2112

2005

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LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders

Genome biology and evolution, 2012-01, Vol.4 (2), p.168-183

2012

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Morphological Homoplasy, Life History Evolution, and Historical Biogeography of Plethodontid Salamanders Inferred from Complete Mitochondrial Genomes

Proceedings of the National Academy of Sciences - PNAS, 2004-09, Vol.101 (38), p.13820-13825

2004

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Genome Biology and the Evolution of Cell-Size Diversity

Cold Spring Harbor perspectives in biology, 2015-11, Vol.7 (11), p.a019125

Mueller, Rachel Lockridge

2015

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Evolution along the mutation gradient in the dynamic mitochondrial genome of salamanders

Genome biology and evolution, 2013-01, Vol.5 (9), p.1652-1660

2013

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Transposable Element Diversity Remains High in Gigantic Genomes

Journal of molecular evolution, 2022-10, Vol.90 (5), p.332-341

2022

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Spatio-temporal regulation of Wnt and retinoic acid signaling by tbx16/spadetail during zebrafish mesoderm differentiation

BMC genomics, 2010-09, Vol.11 (1), p.492-492

2010

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Variation in DNA substitution rates among lineages erroneously inferred from simulated clock-like data

PloS one, 2010-03, Vol.5 (3), p.e9649-e9649

2010

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Genetic drift and mutational hazard in the evolution of salamander genomic gigantism

Evolution, 2016-12, Vol.70 (12), p.2865-2878

2016

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Gigantic animal cells suggest organellar scaling mechanisms across a 50-fold range in cell volume

Evolution, 2024-02, Vol.78 (3), p.442-452

2024

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LOW METABOLIC RATES IN SALAMANDERS ARE CORRELATED WITH WEAK SELECTIVE CONSTRAINTS ON MITOCHONDRIAL GENES

Evolution, 2013-03, Vol.67 (3), p.894-899

2013

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Hellbender genome sequences shed light on genomic expansion at the base of crown salamanders

Genome biology and evolution, 2014-07, Vol.6 (7), p.1818-1829

2014

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Genus-Wide Characterization of Bumblebee Genomes Provides Insights into Their Evolution and Variation in Ecological and Behavioral Traits

Molecular biology and evolution, 2021-02, Vol.38 (2), p.486-501

2021

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Gigantic Genomes Provide Empirical Tests of Transposable Element Dynamics Models

Closing the ring: historical biogeography of the salamander ring species Ensatina eschscholtzii

piRNAs and Evolutionary Trajectories in Genome Size and Content

Gigantic genomes of salamanders indicate that body temperature, not genome size, is the driver of global methylation and 5‐methylcytosine deamination in vertebrates

Phylogenomics Reveals Ancient Gene Tree Discordance in the Amphibian Tree of Life

Genome sequence of the Asian Tiger mosquito,Aedes albopictus,reveals insights into its biology, genetics, and evolution

Evolutionary Rates, Divergence Dates, and the Performance of Mitochondrial Genes in Bayesian Phylogenetic Analysis

Genome size drives morphological evolution in organ‐specific ways

Polymorphic duplicate genes and persistent non-coding sequences reveal heterogeneous patterns of mitochondrial DNA loss in salamanders

DNA transposons have colonized the genome of the giant virus Pandoravirus salinus

Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders

A new time-scale for ray-finned fish evolution

Molecular mechanisms of extensive mitochondrial gene rearrangement in plethodontid salamanders

LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders

Morphological Homoplasy, Life History Evolution, and Historical Biogeography of Plethodontid Salamanders Inferred from Complete Mitochondrial Genomes

Genome Biology and the Evolution of Cell-Size Diversity

Evolution along the mutation gradient in the dynamic mitochondrial genome of salamanders

Transposable Element Diversity Remains High in Gigantic Genomes

Spatio-temporal regulation of Wnt and retinoic acid signaling by tbx16/spadetail during zebrafish mesoderm differentiation

Variation in DNA substitution rates among lineages erroneously inferred from simulated clock-like data

Genetic drift and mutational hazard in the evolution of salamander genomic gigantism

Gigantic animal cells suggest organellar scaling mechanisms across a 50-fold range in cell volume

LOW METABOLIC RATES IN SALAMANDERS ARE CORRELATED WITH WEAK SELECTIVE CONSTRAINTS ON MITOCHONDRIAL GENES

Hellbender genome sequences shed light on genomic expansion at the base of crown salamanders

Genus-Wide Characterization of Bumblebee Genomes Provides Insights into Their Evolution and Variation in Ecological and Behavioral Traits

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